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["Table S10. Data of lncRNA-mRNA network"]
["oxidation-reduction process"]
["transcript_id","gene_id","gene_location","pvalue","qvalue","Status","Target_prediction_method","Target_gene_id","Target_GO_id","Target_GO_description","Target_KO_id","Target_KO_description"]
["TCONS_00195403","XLOC_139199","9:66268717-66270455",{"v":5e-05,"d":"5.00E-05"},0.00428946,"Novel_lncRNA","co_location","Solyc09g074410.3","GO:0008150,GO:0016491,GO:0008152,GO:0003674,GO:0003824","biological_process,oxidoreductase activity,metabolic process,molecular_function,catalytic activity","--","--"]
["TCONS_00195403","XLOC_139199","9:66268717-66270455",{"v":5e-05,"d":"5.00E-05"},0.00428946,"Novel_lncRNA","co_expression","Solyc05g016290.2","GO:0016491,GO:0055114,GO:0008152,GO:0008150,GO:0003824,GO:0003674,GO:0044710","oxidoreductase activity,oxidation-reduction process,metabolic process,biological_process,catalytic activity,molecular_function,single-organism metabolic process","--","--"]
["TCONS_00190110","XLOC_134815","4:16278737-16281202",0.00105,0.0410637,"Novel_lncRNA","co_expression","Solyc02g062180.3","GO:0051213,GO:0016706,GO:0016705,GO:0016491,GO:0055114,GO:0044710,GO:0003674,GO:0008150,GO:0008152,GO:0003824","dioxygenase activity,oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors,oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen,oxidoreductase activity,oxidation-reduction process,single-organism metabolic process,molecular_function,biological_process,metabolic process,catalytic activity","--","--"]
["TCONS_00125195","XLOC_087436","11:45403858-45404930",{"v":5e-05,"d":"5.00E-05"},0.00428946,"Novel_lncRNA","co_location","Solyc11g056410.2","GO:0016020,GO:0004129,GO:0016675,GO:0016676,GO:0015077,GO:0015002,GO:0015078,GO:0022891,GO:0005575,GO:0022892,GO:0015075,GO:0022890,GO:0008324,GO:0016491,GO:0005488,GO:0022857,GO:0003674,GO:0005507,GO:0005215,GO:0003824,GO:0043167,GO:0046914,GO:0043169,GO:0046872","membrane,cytochrome-c oxidase activity,oxidoreductase activity, acting on a heme group of donors,oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor,monovalent inorganic cation transmembrane transporter activity,heme-copper terminal oxidase activity,hydrogen ion transmembrane transporter activity,substrate-specific transmembrane transporter activity,cellular_component,substrate-specific transporter activity,ion transmembrane transporter activity,inorganic cation transmembrane transporter activity,cation transmembrane transporter activity,oxidoreductase activity,binding,transmembrane transporter activity,molecular_function,copper ion binding,transporter activity,catalytic activity,ion binding,transition metal ion binding,cation binding,metal ion binding","sly00190,sly01100","Oxidative phosphorylation,Metabolic pathways"]
["TCONS_00125195","XLOC_087436","11:45403858-45404930",{"v":5e-05,"d":"5.00E-05"},0.00428946,"Novel_lncRNA","co_location","Solyc11g056390.2","--","--","sly00190,sly01100","Oxidative phosphorylation,Metabolic pathways"]
["TCONS_00125195","XLOC_087436","11:45403858-45404930",{"v":5e-05,"d":"5.00E-05"},0.00428946,"Novel_lncRNA","co_location","Solyc11g056370.2","GO:0016020,GO:0044425,GO:0055114,GO:0005575,GO:0005739,GO:0016491,GO:0044710,GO:0008137,GO:0003954,GO:0050136,GO:0003674,GO:0005737,GO:0016655,GO:0008152,GO:0005623,GO:0044464,GO:0044444,GO:0070469,GO:0008150,GO:0031090,GO:0044429,GO:0031966,GO:0031967,GO:0031975,GO:0005740,GO:0044424,GO:0005622,GO:0003824,GO:0016651,GO:0043229,GO:0043226,GO:0044446,GO:0044422,GO:0043231,GO:0043227","membrane,membrane part,oxidation-reduction process,cellular_component,mitochondrion,oxidoreductase activity,single-organism metabolic process,NADH dehydrogenase (ubiquinone) activity,NADH dehydrogenase activity,NADH dehydrogenase (quinone) activity,molecular_function,cytoplasm,oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor,metabolic process,cell,cell part,cytoplasmic part,respiratory chain,biological_process,organelle membrane,mitochondrial part,mitochondrial membrane,organelle envelope,envelope,mitochondrial envelope,intracellular part,intracellular,catalytic activity,oxidoreductase activity, acting on NAD(P)H,intracellular organelle,organelle,intracellular organelle part,organelle part,intracellular membrane-bounded organelle,membrane-bounded organelle","sly00190,sly01100","Oxidative phosphorylation,Metabolic pathways"]
["TCONS_00125195","XLOC_087436","11:45403858-45404930",{"v":5e-05,"d":"5.00E-05"},0.00428946,"Novel_lncRNA","co_expression","Solyc03g096640.3","GO:0016491,GO:0008152,GO:0008150,GO:0003824,GO:0003674","oxidoreductase activity,metabolic process,biological_process,catalytic activity,molecular_function","sly00960,sly01100,sly01110","Tropane, piperidine and pyridine alkaloid biosynthesis,Metabolic pathways,Biosynthesis of secondary metabolites"]
["TCONS_00129734","XLOC_090571","9:11309985-11312281",0.00095,0.0384387,"Novel_lncRNA","co_location","Solyc09g015880.3","--","--","sly00190,sly01100","Oxidative phosphorylation,Metabolic pathways"]
["TCONS_00003208","XLOC_002621","2:29207131-29208262",0.00105,0.0410637,"Novel_lncRNA","co_expression","Solyc07g026650.3","GO:0044710,GO:0009815,GO:0005488,GO:0016491,GO:0046872,GO:0043169,GO:0055114,GO:0043167,GO:0016641,GO:0003824,GO:0008152,GO:0016638,GO:0008150,GO:0051213,GO:0009888,GO:0071704,GO:0003674,GO:0016706,GO:0044237,GO:0048856,GO:0071554,GO:0032502,GO:0010089,GO:0016705,GO:0044036,GO:0010087,GO:0044260,GO:0009987,GO:0044699,GO:0043170,GO:0044763,GO:0071840","single-organism metabolic process,1-aminocyclopropane-1-carboxylate oxidase activity,binding,oxidoreductase activity,metal ion binding,cation binding,oxidation-reduction process,ion binding,oxidoreductase activity, acting on the CH-NH2 group of donors, oxygen as acceptor,catalytic activity,metabolic process,oxidoreductase activity, acting on the CH-NH2 group of donors,biological_process,dioxygenase activity,tissue development,organic substance metabolic process,molecular_function,oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors,cellular metabolic process,anatomical structure development,cell wall organization or biogenesis,developmental process,xylem development,oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen,cell wall macromolecule metabolic process,phloem or xylem histogenesis,cellular macromolecule metabolic process,cellular process,single-organism process,macromolecule metabolic process,single-organism cellular process,cellular component organization or biogenesis","sly01110,sly00270,sly01100","Biosynthesis of secondary metabolites,Cysteine and methionine metabolism,Metabolic pathways"]
["TCONS_00003208","XLOC_002621","2:29207131-29208262",0.00105,0.0410637,"Novel_lncRNA","co_expression","Solyc08g081000.3","GO:0051213,GO:0016706,GO:0016705,GO:0016491,GO:0055114,GO:0044710,GO:0046872,GO:0043169,GO:0003824,GO:0044262,GO:0005975,GO:0044036,GO:0043167,GO:0005976,GO:0010410,GO:0016051,GO:0010383,GO:0034637,GO:0046914,GO:0009791,GO:0022414,GO:0048608,GO:0061458,GO:0044264,GO:0044707,GO:0033692,GO:0000003,GO:0001071,GO:0003700,GO:0044723,GO:0048731,GO:0032501,GO:0007275,GO:0003674,GO:0005515,GO:0003006,GO:0000271,GO:0006464,GO:0036211,GO:0071554,GO:0032502,GO:0008152,GO:0045492,GO:0045491,GO:0048856,GO:0070592,GO:0042546,GO:0044038,GO:0070589,GO:0050665,GO:0016926,GO:0043412,GO:0044699,GO:0042743,GO:0008150,GO:0044267,GO:0044763,GO:0007049,GO:0005488,GO:1901576,GO:0072593,GO:0009058,GO:0070646,GO:0010413,GO:0008270,GO:0071704,GO:0071840,GO:0044238,GO:0010228,GO:0044249,GO:0003677,GO:0097159,GO:1901363,GO:0043231,GO:0043227,GO:0005634,GO:0000278,GO:0044085,GO:0019538,GO:0070647,GO:0034645,GO:0016070,GO:0009059,GO:0044237,GO:0010467,GO:1901360,GO:0005575,GO:0044424,GO:0043229,GO:0043226,GO:0044260,GO:0005623,GO:0044464,GO:0006807,GO:0046483,GO:0006725,GO:0090304,GO:0005622,GO:0034641,GO:0043170,GO:0009987,GO:0003676,GO:0006396,GO:0006139","dioxygenase activity,oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors,oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen,oxidoreductase activity,oxidation-reduction process,single-organism metabolic process,metal ion binding,cation binding,catalytic activity,cellular carbohydrate metabolic process,carbohydrate metabolic process,cell wall macromolecule metabolic process,ion binding,polysaccharide metabolic process,hemicellulose metabolic process,carbohydrate biosynthetic process,cell wall polysaccharide metabolic process,cellular carbohydrate biosynthetic process,transition metal ion binding,post-embryonic development,reproductive process,reproductive structure development,reproductive system development,cellular polysaccharide metabolic process,single-multicellular organism process,cellular polysaccharide biosynthetic process,reproduction,nucleic acid binding transcription factor activity,sequence-specific DNA binding transcription factor activity,single-organism carbohydrate metabolic process,system development,multicellular organismal process,multicellular organismal development,molecular_function,protein binding,developmental process involved in reproduction,polysaccharide biosynthetic process,cellular protein modification process,protein modification process,cell wall organization or biogenesis,developmental process,metabolic process,xylan biosynthetic process,xylan metabolic process,anatomical structure development,cell wall polysaccharide biosynthetic process,cell wall biogenesis,cell wall macromolecule biosynthetic process,cellular component macromolecule biosynthetic process,hydrogen peroxide biosynthetic process,protein desumoylation,macromolecule modification,single-organism process,hydrogen peroxide metabolic process,biological_process,cellular protein metabolic process,single-organism cellular process,cell cycle,binding,organic substance biosynthetic process,reactive oxygen species metabolic process,biosynthetic process,protein modification by small protein removal,glucuronoxylan metabolic process,zinc ion binding,organic substance metabolic process,cellular component organization or biogenesis,primary metabolic process,vegetative to reproductive phase transition of meristem,cellular biosynthetic process,DNA binding,organic cyclic compound binding,heterocyclic compound binding,intracellular membrane-bounded organelle,membrane-bounded organelle,nucleus,mitotic cell cycle,cellular component biogenesis,protein metabolic process,protein modification by small protein conjugation or removal,cellular macromolecule biosynthetic process,RNA metabolic process,macromolecule biosynthetic process,cellular metabolic process,gene expression,organic cyclic compound metabolic process,cellular_component,intracellular part,intracellular organelle,organelle,cellular macromolecule metabolic process,cell,cell part,nitrogen compound metabolic process,heterocycle metabolic process,cellular aromatic compound metabolic process,nucleic acid metabolic process,intracellular,cellular nitrogen compound metabolic process,macromolecule metabolic process,cellular process,nucleic acid binding,RNA processing,nucleobase-containing compound metabolic process","--","--"]
["TCONS_00099819","XLOC_069665","2:39146180-39148982",{"v":5e-05,"d":"5.00E-05"},0.00428946,"Novel_lncRNA","co_expression","Solyc06g060070.3","GO:0051213,GO:0016706,GO:0016705,GO:0016491,GO:0044711,GO:0006066,GO:0055114,GO:0046165,GO:1901615,GO:0044710,GO:1901617,GO:0046872,GO:0043169,GO:0044283,GO:0003824,GO:0015698,GO:0010106,GO:0006694,GO:0008202,GO:0006950,GO:0007154,GO:0043167,GO:0006826,GO:0010167,GO:0042446,GO:0016129,GO:0016132,GO:0016128,GO:0016131,GO:0015706,GO:0010817,GO:0065007,GO:0033554,GO:0051716,GO:0006820,GO:0042445,GO:0065008,GO:0050896,GO:1901698,GO:0003674,GO:0042221,GO:0009267,GO:0042594,GO:1901362,GO:0008610,GO:0031669,GO:0031667,GO:0030001,GO:0008152,GO:0000041,GO:0006629,GO:0009605,GO:0031668,GO:0071496,GO:0009991,GO:0006812,GO:0044699,GO:0008150,GO:0006811,GO:1901700,GO:0044763,GO:0005488,GO:1901576,GO:0044281,GO:0009058,GO:0071704,GO:0071705,GO:0044238,GO:0010035,GO:1901360,GO:0044765,GO:0006810,GO:0051234,GO:0009987,GO:0051179","dioxygenase activity,oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors,oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen,oxidoreductase activity,single-organism biosynthetic process,alcohol metabolic process,oxidation-reduction process,alcohol biosynthetic process,organic hydroxy compound metabolic process,single-organism metabolic process,organic hydroxy compound biosynthetic process,metal ion binding,cation binding,small molecule biosynthetic process,catalytic activity,inorganic anion transport,cellular response to iron ion starvation,steroid biosynthetic process,steroid metabolic process,response to stress,cell communication,ion binding,iron ion transport,response to nitrate,hormone biosynthetic process,phytosteroid biosynthetic process,brassinosteroid biosynthetic process,phytosteroid metabolic process,brassinosteroid metabolic process,nitrate transport,regulation of hormone levels,biological regulation,cellular response to stress,cellular response to stimulus,anion transport,hormone metabolic process,regulation of biological quality,response to stimulus,response to nitrogen compound,molecular_function,response to chemical stimulus,cellular response to starvation,response to starvation,organic cyclic compound biosynthetic process,lipid biosynthetic process,cellular response to nutrient levels,response to nutrient levels,metal ion transport,metabolic process,transition metal ion transport,lipid metabolic process,response to external stimulus,cellular response to extracellular stimulus,cellular response to external stimulus,response to extracellular stimulus,cation transport,single-organism process,biological_process,ion transport,response to oxygen-containing compound,single-organism cellular process,binding,organic substance biosynthetic process,small molecule metabolic process,biosynthetic process,organic substance metabolic process,nitrogen compound transport,primary metabolic process,response to inorganic substance,organic cyclic compound metabolic process,single-organism transport,transport,establishment of localization,cellular process,localization","sly00270,sly01110,sly01100","Cysteine and methionine metabolism,Biosynthesis of secondary metabolites,Metabolic pathways"]
["TCONS_00125390","XLOC_087617","5:30205477-30208471",{"v":5e-05,"d":"5.00E-05"},0.00428946,"Novel_lncRNA","co_location","Solyc05g024040.2","GO:0055114,GO:0044710,GO:0016491,GO:0003824,GO:0008150,GO:0003674,GO:0008152","oxidation-reduction process,single-organism metabolic process,oxidoreductase activity,catalytic activity,biological_process,molecular_function,metabolic process","--","--"]
["TCONS_00125390","XLOC_087617","5:30205477-30208471",{"v":5e-05,"d":"5.00E-05"},0.00428946,"Novel_lncRNA","co_location","Solyc05g024030.2","GO:0055114,GO:0044710,GO:0016491,GO:0003824,GO:0008150,GO:0003674,GO:0008152","oxidation-reduction process,single-organism metabolic process,oxidoreductase activity,catalytic activity,biological_process,molecular_function,metabolic process","--","--"]
["TCONS_00003208","XLOC_002621","2:29207131-29208262",0.00105,0.0410637,"Novel_lncRNA","co_expression","Solyc03g031880.3","GO:0016491,GO:0055114,GO:0003824,GO:0044710,GO:0008150,GO:0003674,GO:0008152","oxidoreductase activity,oxidation-reduction process,catalytic activity,single-organism metabolic process,biological_process,molecular_function,metabolic process","sly00330,sly00410","Arginine and proline metabolism,beta-Alanine metabolism"]
["TCONS_00003208","XLOC_002621","2:29207131-29208262",0.00105,0.0410637,"Novel_lncRNA","co_expression","Solyc03g083440.3","GO:0003824,GO:0048037,GO:0055114,GO:0044710,GO:0016491,GO:0008152,GO:0008150,GO:0043648,GO:0043650,GO:0016040,GO:0045181,GO:0019752,GO:0043167,GO:0043436,GO:0006082,GO:0006536,GO:0010181,GO:0046872,GO:0043169,GO:0009064,GO:0005506,GO:0006537,GO:0015930,GO:0050662,GO:0016638,GO:0044281,GO:0003674,GO:0016639,GO:0050660,GO:0043168,GO:0071704,GO:0006520,GO:0009084,GO:0044238,GO:0016053,GO:0046394,GO:0044237,GO:0046914,GO:0044711,GO:1901605,GO:0051536,GO:0051540,GO:0044283,GO:0008652,GO:1901607,GO:1901564,GO:0009987,GO:1901566,GO:0097159,GO:1901363,GO:0005488,GO:0032553,GO:0036094,GO:0009058,GO:0000166,GO:1901265,GO:1901576,GO:0006807,GO:0044249","catalytic activity,cofactor binding,oxidation-reduction process,single-organism metabolic process,oxidoreductase activity,metabolic process,biological_process,dicarboxylic acid metabolic process,dicarboxylic acid biosynthetic process,glutamate synthase (NADH) activity,glutamate synthase activity, NAD(P)H as acceptor,carboxylic acid metabolic process,ion binding,oxoacid metabolic process,organic acid metabolic process,glutamate metabolic process,FMN binding,metal ion binding,cation binding,glutamine family amino acid metabolic process,iron ion binding,glutamate biosynthetic process,glutamate synthase activity,coenzyme binding,oxidoreductase activity, acting on the CH-NH2 group of donors,small molecule metabolic process,molecular_function,oxidoreductase activity, acting on the CH-NH2 group of donors, NAD or NADP as acceptor,flavin adenine dinucleotide binding,anion binding,organic substance metabolic process,cellular amino acid metabolic process,glutamine family amino acid biosynthetic process,primary metabolic process,organic acid biosynthetic process,carboxylic acid biosynthetic process,cellular metabolic process,transition metal ion binding,single-organism biosynthetic process,alpha-amino acid metabolic process,iron-sulfur cluster binding,metal cluster binding,small molecule biosynthetic process,cellular amino acid biosynthetic process,alpha-amino acid biosynthetic process,organonitrogen compound metabolic process,cellular process,organonitrogen compound biosynthetic process,organic cyclic compound binding,heterocyclic compound binding,binding,ribonucleotide binding,small molecule binding,biosynthetic process,nucleotide binding,nucleoside phosphate binding,organic substance biosynthetic process,nitrogen compound metabolic process,cellular biosynthetic process","sly01100,sly00250,sly01110,sly00910,sly01230","Metabolic pathways,Alanine, aspartate and glutamate metabolism,Biosynthesis of secondary metabolites,Nitrogen metabolism,Biosynthesis of amino acids"]
["TCONS_00003208","XLOC_002621","2:29207131-29208262",0.00105,0.0410637,"Novel_lncRNA","co_expression","Solyc10g076680.2","GO:0051213,GO:0016706,GO:0016705,GO:0016491,GO:0055114,GO:0044710,GO:0003824,GO:0003674,GO:0008152,GO:0008150","dioxygenase activity,oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors,oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen,oxidoreductase activity,oxidation-reduction process,single-organism metabolic process,catalytic activity,molecular_function,metabolic process,biological_process","--","--"]
["TCONS_00003208","XLOC_002621","2:29207131-29208262",0.00105,0.0410637,"Novel_lncRNA","co_expression","Solyc01g017090.3","GO:0016491,GO:0055114,GO:0044710,GO:0016651,GO:0003824,GO:0003954,GO:0050136,GO:0016310,GO:0006091,GO:0045333,GO:0016655,GO:0015980,GO:0003674,GO:0042773,GO:0008152,GO:0006119,GO:0022904,GO:0008137,GO:0008150,GO:0006796,GO:0006793,GO:0044237,GO:0022900,GO:0009987","oxidoreductase activity,oxidation-reduction process,single-organism metabolic process,oxidoreductase activity, acting on NAD(P)H,catalytic activity,NADH dehydrogenase activity,NADH dehydrogenase (quinone) activity,phosphorylation,generation of precursor metabolites and energy,cellular respiration,oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor,energy derivation by oxidation of organic compounds,molecular_function,ATP synthesis coupled electron transport,metabolic process,oxidative phosphorylation,respiratory electron transport chain,NADH dehydrogenase (ubiquinone) activity,biological_process,phosphate-containing compound metabolic process,phosphorus metabolic process,cellular metabolic process,electron transport chain,cellular process","sly01100,sly00190","Metabolic pathways,Oxidative phosphorylation"]
["TCONS_00003208","XLOC_002621","2:29207131-29208262",0.00105,0.0410637,"Novel_lncRNA","co_expression","Solyc05g005470.3","GO:0016667,GO:0016491,GO:0047134,GO:0016668,GO:0016651,GO:0003674,GO:0003824","oxidoreductase activity, acting on a sulfur group of donors,oxidoreductase activity,protein-disulfide reductase activity,oxidoreductase activity, acting on a sulfur group of donors, NAD(P) as acceptor,oxidoreductase activity, acting on NAD(P)H,molecular_function,catalytic activity","--","--"]
["TCONS_00003208","XLOC_002621","2:29207131-29208262",0.00105,0.0410637,"Novel_lncRNA","co_expression","Solyc11g008680.2","GO:0044710,GO:0016491,GO:0044281,GO:0044711,GO:0055114,GO:0044283,GO:0043436,GO:0006082,GO:0003824,GO:0019752,GO:0016053,GO:0046394,GO:0008152,GO:1901576,GO:0009058,GO:0008150,GO:0044249,GO:0071704,GO:0045300,GO:0044238,GO:0003674,GO:0044237,GO:0006629,GO:0072330,GO:0016717,GO:0016705,GO:0043231,GO:0043227,GO:0009987,GO:0032787,GO:0043229,GO:0043226,GO:0006631,GO:0006633,GO:0005575,GO:0044255,GO:0044424,GO:0008610,GO:0005622,GO:0005623,GO:0044464,GO:0009507,GO:0009536,GO:0005737,GO:0044444","single-organism metabolic process,oxidoreductase activity,small molecule metabolic process,single-organism biosynthetic process,oxidation-reduction process,small molecule biosynthetic process,oxoacid metabolic process,organic acid metabolic process,catalytic activity,carboxylic acid metabolic process,organic acid biosynthetic process,carboxylic acid biosynthetic process,metabolic process,organic substance biosynthetic process,biosynthetic process,biological_process,cellular biosynthetic process,organic substance metabolic process,acyl-[acyl-carrier-protein] desaturase activity,primary metabolic process,molecular_function,cellular metabolic process,lipid metabolic process,monocarboxylic acid biosynthetic process,oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water,oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen,intracellular membrane-bounded organelle,membrane-bounded organelle,cellular process,monocarboxylic acid metabolic process,intracellular organelle,organelle,fatty acid metabolic process,fatty acid biosynthetic process,cellular_component,cellular lipid metabolic process,intracellular part,lipid biosynthetic process,intracellular,cell,cell part,chloroplast,plastid,cytoplasm,cytoplasmic part","sly01040,sly00061,sly01212","Biosynthesis of unsaturated fatty acids,Fatty acid biosynthesis,Fatty acid metabolism"]
["TCONS_00150053","XLOC_104931","7:4969119-4970000",{"v":5e-05,"d":"5.00E-05"},0.00428946,"Novel_lncRNA","co_location","Solyc07g014670.3","GO:0055114,GO:0020037,GO:0044710,GO:0046906,GO:0016491,GO:0005506,GO:0003824,GO:0004497,GO:0008150,GO:0043169,GO:0003674,GO:0046914,GO:0046872,GO:0016705,GO:0008152,GO:0043167,GO:0005488,GO:0097159,GO:1901363","oxidation-reduction process,heme binding,single-organism metabolic process,tetrapyrrole binding,oxidoreductase activity,iron ion binding,catalytic activity,monooxygenase activity,biological_process,cation binding,molecular_function,transition metal ion binding,metal ion binding,oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen,metabolic process,ion binding,binding,organic cyclic compound binding,heterocyclic compound binding","--","--"]
["TCONS_00150053","XLOC_104931","7:4969119-4970000",{"v":5e-05,"d":"5.00E-05"},0.00428946,"Novel_lncRNA","co_expression","Solyc05g055590.2","GO:0016491,GO:0055114,GO:0003676,GO:0005488,GO:0044710,GO:0003674,GO:0003677,GO:0008150,GO:0097159,GO:1901363,GO:0008152,GO:0003824,GO:0005515","oxidoreductase activity,oxidation-reduction process,nucleic acid binding,binding,single-organism metabolic process,molecular_function,DNA binding,biological_process,organic cyclic compound binding,heterocyclic compound binding,metabolic process,catalytic activity,protein binding","--","--"]
["TCONS_00150053","XLOC_104931","7:4969119-4970000",{"v":5e-05,"d":"5.00E-05"},0.00428946,"Novel_lncRNA","co_expression","Solyc01g108630.3","GO:0016491,GO:0055114,GO:0044710,GO:0003824,GO:0051536,GO:0051540,GO:0020037,GO:0046906,GO:0003674,GO:0008152,GO:0008150,GO:0005488,GO:0097159,GO:1901363","oxidoreductase activity,oxidation-reduction process,single-organism metabolic process,catalytic activity,iron-sulfur cluster binding,metal cluster binding,heme binding,tetrapyrrole binding,molecular_function,metabolic process,biological_process,binding,organic cyclic compound binding,heterocyclic compound binding","sly00910","Nitrogen metabolism"]
["TCONS_00150053","XLOC_104931","7:4969119-4970000",{"v":5e-05,"d":"5.00E-05"},0.00428946,"Novel_lncRNA","co_expression","Solyc03g006690.2","GO:0016491,GO:0055114,GO:0044710,GO:0003824,GO:0043167,GO:0003674,GO:0050662,GO:0008152,GO:0043168,GO:0048037,GO:0008150,GO:0005488,GO:0050660,GO:0036094,GO:0097159,GO:1901363,GO:0000166,GO:1901265","oxidoreductase activity,oxidation-reduction process,single-organism metabolic process,catalytic activity,ion binding,molecular_function,coenzyme binding,metabolic process,anion binding,cofactor binding,biological_process,binding,flavin adenine dinucleotide binding,small molecule binding,organic cyclic compound binding,heterocyclic compound binding,nucleotide binding,nucleoside phosphate binding","--","--"]
["TCONS_00150053","XLOC_104931","7:4969119-4970000",{"v":5e-05,"d":"5.00E-05"},0.00428946,"Novel_lncRNA","co_expression","Solyc02g068710.3","GO:0032542,GO:0016667,GO:0016491,GO:0016209,GO:0043167,GO:0055114,GO:0005488,GO:0044710,GO:0003674,GO:0008150,GO:0097159,GO:1901363,GO:0008152,GO:0043168,GO:0003824,GO:0036094,GO:0035639,GO:0032553,GO:0005524,GO:0001883,GO:0032550,GO:0032555,GO:0017076,GO:0032549,GO:0001882,GO:0032559,GO:0030554,GO:0000166,GO:1901265","sulfiredoxin activity,oxidoreductase activity, acting on a sulfur group of donors,oxidoreductase activity,antioxidant activity,ion binding,oxidation-reduction process,binding,single-organism metabolic process,molecular_function,biological_process,organic cyclic compound binding,heterocyclic compound binding,metabolic process,anion binding,catalytic activity,small molecule binding,purine ribonucleoside triphosphate binding,ribonucleotide binding,ATP binding,purine nucleoside binding,purine ribonucleoside binding,purine ribonucleotide binding,purine nucleotide binding,ribonucleoside binding,nucleoside binding,adenyl ribonucleotide binding,adenyl nucleotide binding,nucleotide binding,nucleoside phosphate binding","--","--"]
["TCONS_00089053","XLOC_062157","3:21563483-21571331",0.0003,0.0170986,"Novel_lncRNA","co_expression","Solyc12g006460.2","GO:0046872,GO:0043169,GO:0016705,GO:0016491,GO:0005506,GO:0043167,GO:0046914,GO:0055114,GO:0020037,GO:0005488,GO:0046906,GO:0044710,GO:0003674,GO:0004497,GO:0008150,GO:0097159,GO:1901363,GO:0008152,GO:0003824","metal ion binding,cation binding,oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen,oxidoreductase activity,iron ion binding,ion binding,transition metal ion binding,oxidation-reduction process,heme binding,binding,tetrapyrrole binding,single-organism metabolic process,molecular_function,monooxygenase activity,biological_process,organic cyclic compound binding,heterocyclic compound binding,metabolic process,catalytic activity","sly01110,sly00904,sly01100","Biosynthesis of secondary metabolites,Diterpenoid biosynthesis,Metabolic pathways"]
["TCONS_00089053","XLOC_062157","3:21563483-21571331",0.0003,0.0170986,"Novel_lncRNA","co_expression","Solyc04g071800.3","GO:0046906,GO:0003824,GO:0055114,GO:0044710,GO:0016491,GO:0008152,GO:0008150,GO:0043167,GO:0020037,GO:0046872,GO:0043169,GO:0005506,GO:0003674,GO:0004497,GO:0016705,GO:0046914,GO:0097159,GO:1901363,GO:0005488","tetrapyrrole binding,catalytic activity,oxidation-reduction process,single-organism metabolic process,oxidoreductase activity,metabolic process,biological_process,ion binding,heme binding,metal ion binding,cation binding,iron ion binding,molecular_function,monooxygenase activity,oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen,transition metal ion binding,organic cyclic compound binding,heterocyclic compound binding,binding","--","--"]
["TCONS_00089053","XLOC_062157","3:21563483-21571331",0.0003,0.0170986,"Novel_lncRNA","co_expression","Solyc04g050620.3","GO:0046872,GO:0043169,GO:0016705,GO:0016491,GO:0005506,GO:0043167,GO:0046914,GO:0055114,GO:0020037,GO:0005488,GO:0046906,GO:0044710,GO:0003674,GO:0004497,GO:0008150,GO:0097159,GO:1901363,GO:0008152,GO:0003824","metal ion binding,cation binding,oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen,oxidoreductase activity,iron ion binding,ion binding,transition metal ion binding,oxidation-reduction process,heme binding,binding,tetrapyrrole binding,single-organism metabolic process,molecular_function,monooxygenase activity,biological_process,organic cyclic compound binding,heterocyclic compound binding,metabolic process,catalytic activity","--","--"]
["TCONS_00089053","XLOC_062157","3:21563483-21571331",0.0003,0.0170986,"Novel_lncRNA","co_expression","Solyc02g080530.3","GO:0044710,GO:0005488,GO:0016491,GO:0046872,GO:0043169,GO:0055114,GO:0043167,GO:0006950,GO:0003824,GO:0004601,GO:0016684,GO:0008152,GO:0016209,GO:0008150,GO:0097159,GO:1901363,GO:0050896,GO:0003674,GO:0006979,GO:0020037,GO:0046906","single-organism metabolic process,binding,oxidoreductase activity,metal ion binding,cation binding,oxidation-reduction process,ion binding,response to stress,catalytic activity,peroxidase activity,oxidoreductase activity, acting on peroxide as acceptor,metabolic process,antioxidant activity,biological_process,organic cyclic compound binding,heterocyclic compound binding,response to stimulus,molecular_function,response to oxidative stress,heme binding,tetrapyrrole binding","sly01110,sly01100,sly00940,sly00360","Biosynthesis of secondary metabolites,Metabolic pathways,Phenylpropanoid biosynthesis,Phenylalanine metabolism"]
["TCONS_00019139","XLOC_014037","1:70737429-70739549",0.00025,0.0149406,"Novel_lncRNA","co_expression","Solyc09g092670.3","GO:0016705,GO:0016491,GO:0055114,GO:0044710,GO:0005506,GO:0046872,GO:0043169,GO:0003824,GO:0043167,GO:0020037,GO:0046914,GO:0046906,GO:0003674,GO:0004497,GO:0008152,GO:0008150,GO:0005488,GO:0097159,GO:1901363","oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen,oxidoreductase activity,oxidation-reduction process,single-organism metabolic process,iron ion binding,metal ion binding,cation binding,catalytic activity,ion binding,heme binding,transition metal ion binding,tetrapyrrole binding,molecular_function,monooxygenase activity,metabolic process,biological_process,binding,organic cyclic compound binding,heterocyclic compound binding","--","--"]
["TCONS_00019139","XLOC_014037","1:70737429-70739549",0.00025,0.0149406,"Novel_lncRNA","co_expression","Solyc07g055460.3","GO:0016705,GO:0016491,GO:0055114,GO:0044710,GO:0005506,GO:0046872,GO:0043169,GO:0003824,GO:0043167,GO:0020037,GO:0046914,GO:0046906,GO:0003674,GO:0004497,GO:0008152,GO:0008150,GO:0005488,GO:0097159,GO:1901363","oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen,oxidoreductase activity,oxidation-reduction process,single-organism metabolic process,iron ion binding,metal ion binding,cation binding,catalytic activity,ion binding,heme binding,transition metal ion binding,tetrapyrrole binding,molecular_function,monooxygenase activity,metabolic process,biological_process,binding,organic cyclic compound binding,heterocyclic compound binding","--","--"]
["TCONS_00099820","XLOC_069665","2:39146180-39148982",{"v":5e-05,"d":"5.00E-05"},0.00428946,"Novel_lncRNA","co_location","Solyc02g069250.3","GO:0055114,GO:0016491,GO:0005488,GO:0008270,GO:0044710,GO:0043169,GO:0046872,GO:0046914,GO:0008152,GO:0043167,GO:0003824,GO:0008150,GO:0003674","oxidation-reduction process,oxidoreductase activity,binding,zinc ion binding,single-organism metabolic process,cation binding,metal ion binding,transition metal ion binding,metabolic process,ion binding,catalytic activity,biological_process,molecular_function","sly00940,sly01100,sly01110","Phenylpropanoid biosynthesis,Metabolic pathways,Biosynthesis of secondary metabolites"]
["TCONS_00026385","XLOC_017692","10:5479873-5485103",0.00035,0.0190872,"Novel_lncRNA","co_location","Solyc10g017510.3","GO:0008150,GO:0003824,GO:0008152,GO:0016705,GO:0097159,GO:1901363,GO:0005506,GO:0003674,GO:0004497,GO:0005488,GO:0046906,GO:0020037,GO:0016491,GO:0043167,GO:0046914,GO:0044710,GO:0055114,GO:0043169,GO:0046872","biological_process,catalytic activity,metabolic process,oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen,organic cyclic compound binding,heterocyclic compound binding,iron ion binding,molecular_function,monooxygenase activity,binding,tetrapyrrole binding,heme binding,oxidoreductase activity,ion binding,transition metal ion binding,single-organism metabolic process,oxidation-reduction process,cation binding,metal ion binding","--","--"]
["TCONS_00026385","XLOC_017692","10:5479873-5485103",0.00035,0.0190872,"Novel_lncRNA","co_location","Solyc10g017570.3","GO:0008150,GO:0003824,GO:0008152,GO:0003674,GO:0016491","biological_process,catalytic activity,metabolic process,molecular_function,oxidoreductase activity","sly01110,sly00902","Biosynthesis of secondary metabolites,Monoterpenoid biosynthesis"]
["TCONS_00058627","XLOC_042446","12:38353321-38354925",0.0014,0.0498795,"Novel_lncRNA","co_expression","Solyc09g091570.3","GO:0016705,GO:0071949,GO:0044248,GO:0044281,GO:0044283,GO:1901575,GO:0019752,GO:0043436,GO:0006082,GO:0044710,GO:0016491,GO:0044711,GO:0004497,GO:0044237,GO:0009438,GO:0019243,GO:0051596,GO:0009056,GO:0006089,GO:0046185,GO:0044249,GO:0016709,GO:0009058,GO:0008152,GO:1901576,GO:0071704,GO:1901615,GO:0006743,GO:0006744,GO:0055114,GO:0042375,GO:0045426,GO:0042181,GO:1901661,GO:1901663,GO:0048037,GO:0008150,GO:0009987,GO:0050660,GO:0043167,GO:0042180,GO:0097159,GO:1901363,GO:0005488,GO:0050662,GO:0006081,GO:0003824,GO:0032787,GO:0036094,GO:0000166,GO:1901265,GO:0006732,GO:0003674,GO:0009108,GO:0006733,GO:0051186,GO:0043168,GO:0051188","oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen,FAD binding,cellular catabolic process,small molecule metabolic process,small molecule biosynthetic process,organic substance catabolic process,carboxylic acid metabolic process,oxoacid metabolic process,organic acid metabolic process,single-organism metabolic process,oxidoreductase activity,single-organism biosynthetic process,monooxygenase activity,cellular metabolic process,methylglyoxal metabolic process,methylglyoxal catabolic process to D-lactate,methylglyoxal catabolic process,catabolic process,lactate metabolic process,aldehyde catabolic process,cellular biosynthetic process,oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen,biosynthetic process,metabolic process,organic substance biosynthetic process,organic substance metabolic process,organic hydroxy compound metabolic process,ubiquinone metabolic process,ubiquinone biosynthetic process,oxidation-reduction process,quinone cofactor metabolic process,quinone cofactor biosynthetic process,ketone biosynthetic process,quinone metabolic process,quinone biosynthetic process,cofactor binding,biological_process,cellular process,flavin adenine dinucleotide binding,ion binding,cellular ketone metabolic process,organic cyclic compound binding,heterocyclic compound binding,binding,coenzyme binding,cellular aldehyde metabolic process,catalytic activity,monocarboxylic acid metabolic process,small molecule binding,nucleotide binding,nucleoside phosphate binding,coenzyme metabolic process,molecular_function,coenzyme biosynthetic process,oxidoreduction coenzyme metabolic process,cofactor metabolic process,anion binding,cofactor biosynthetic process","sly01100,sly00130,sly01110","Metabolic pathways,Ubiquinone and other terpenoid-quinone biosynthesis,Biosynthesis of secondary metabolites"]
["TCONS_00076846","XLOC_055196","8:7731911-7735026",{"v":5e-05,"d":"5.00E-05"},0.00428946,"Novel_lncRNA","co_expression","Solyc02g088510.3","GO:0008150,GO:0016491,GO:0008152,GO:0044710,GO:0003674,GO:0055114,GO:0003824","biological_process,oxidoreductase activity,metabolic process,single-organism metabolic process,molecular_function,oxidation-reduction process,catalytic activity","--","--"]
["TCONS_00124005","XLOC_086332","5:30205477-30208471",{"v":5e-05,"d":"5.00E-05"},0.00428946,"Novel_lncRNA","co_location","Solyc05g023920.2","GO:0055114,GO:0044710,GO:0005623,GO:0044464,GO:0016491,GO:0005575,GO:0003824,GO:0008150,GO:0071944,GO:0003674,GO:0008152,GO:0005886,GO:0016020,GO:0031224,GO:0016021,GO:0044425","oxidation-reduction process,single-organism metabolic process,cell,cell part,oxidoreductase activity,cellular_component,catalytic activity,biological_process,cell periphery,molecular_function,metabolic process,plasma membrane,membrane,intrinsic to membrane,integral to membrane,membrane part","sly00190,sly01100","Oxidative phosphorylation,Metabolic pathways"]
["TCONS_00081054","XLOC_057811","2:29207131-29208262",0.00105,0.0410637,"Novel_lncRNA","co_expression","Solyc11g021090.2","--","--","sly01100,sly00190","Metabolic pathways,Oxidative phosphorylation"]
["TCONS_000261","XLOC_005831","10:39998759-40000652",{"v":5e-05,"d":"5.00E-05"},0.00428946,"Novel_lncRNA","co_expression","Solyc01g081250.3","--","--","sly00480","Glutathione metabolism"]
["TCONS_00186094","XLOC_132328","3:21563483-21571331",0.0003,0.0170986,"Novel_lncRNA","co_expression","Solyc02g080530.3","GO:0044710,GO:0005488,GO:0016491,GO:0046872,GO:0043169,GO:0055114,GO:0043167,GO:0006950,GO:0003824,GO:0004601,GO:0016684,GO:0008152,GO:0016209,GO:0008150,GO:0097159,GO:1901363,GO:0050896,GO:0003674,GO:0006979,GO:0020037,GO:0046906","single-organism metabolic process,binding,oxidoreductase activity,metal ion binding,cation binding,oxidation-reduction process,ion binding,response to stress,catalytic activity,peroxidase activity,oxidoreductase activity, acting on peroxide as acceptor,metabolic process,antioxidant activity,biological_process,organic cyclic compound binding,heterocyclic compound binding,response to stimulus,molecular_function,response to oxidative stress,heme binding,tetrapyrrole binding","sly01110,sly01100,sly00940,sly00360","Biosynthesis of secondary metabolites,Metabolic pathways,Phenylpropanoid biosynthesis,Phenylalanine metabolism"]
["hormone related"]
["transcript_id","gene_id","gene_location","pvalue","qvalue","Status","Target_prediction_method","Target_gene_id","Target_GO_id","Target_GO_description","Target_KO_id","Target_KO_description"]
["TCONS_00190110","XLOC_134815","4:16278737-16281202",0.00105,0.0410637,"Novel_lncRNA","co_expression","Solyc08g083230.2","GO:0006807,GO:0006139,GO:0090304,GO:0016070,GO:1901360,GO:0046483,GO:0006725,GO:0005634,GO:0034641,GO:0043231,GO:0043227,GO:0019222,GO:0060255,GO:0010467,GO:0080090,GO:0050789,GO:0016053,GO:0046394,GO:0044281,GO:0044283,GO:0007275,GO:0044707,GO:0019752,GO:0043436,GO:0006082,GO:0044710,GO:0032501,GO:0044424,GO:0044711,GO:0048731,GO:0034654,GO:0005622,GO:1901362,GO:0019438,GO:0065007,GO:0044238,GO:0044237,GO:0044446,GO:0044422,GO:0048367,GO:0010468,GO:0032502,GO:0031323,GO:0044249,GO:0043229,GO:0048856,GO:0043226,GO:0016114,GO:0044260,GO:0018130,GO:0044271,GO:0009058,GO:0019219,GO:0006629,GO:0006721,GO:0008152,GO:0005623,GO:0044464,GO:1901576,GO:0051171,GO:0071704,GO:0048366,GO:0009686,GO:0044444,GO:0051252,GO:0016102,GO:0010556,GO:2000112,GO:0009889,GO:0009685,GO:0048827,GO:0006355,GO:2001141,GO:1901700,GO:0031326,GO:0044435,GO:0043170,GO:0016101,GO:0005737,GO:0071396,GO:0044434,GO:0009536,GO:0032774,GO:0031967,GO:0050794,GO:0031975,GO:0009507,GO:0008610,GO:0009739,GO:0009740,GO:0010476,GO:0071370,GO:0006351,GO:0009526,GO:0042221,GO:0034645,GO:1901701,GO:0009941,GO:0071310,GO:0009059,GO:0044767,GO:0044255,GO:0044700,GO:0044699,GO:0023052,GO:0008150,GO:0007165,GO:0007154,GO:0016818,GO:0070887,GO:0009987,GO:0005575,GO:0050896,GO:0016817,GO:0043167,GO:0008299,GO:0051716,GO:0006720,GO:0097159,GO:1901363,GO:0005488,GO:0016787,GO:0010033,GO:0044763,GO:0033993,GO:0009755,GO:0032870,GO:0071495,GO:0003824,GO:0009719,GO:0036094,GO:0000166,GO:1901265,GO:0003674,GO:0035639,GO:0005524,GO:0009725,GO:0043168,GO:0032553,GO:0001883,GO:0032550,GO:0032555,GO:0017076,GO:0032559,GO:0030554,GO:0032549,GO:0001882","nitrogen compound metabolic process,nucleobase-containing compound metabolic process,nucleic acid metabolic process,RNA metabolic process,organic cyclic compound metabolic process,heterocycle metabolic process,cellular aromatic compound metabolic process,nucleus,cellular nitrogen compound metabolic process,intracellular membrane-bounded organelle,membrane-bounded organelle,regulation of metabolic process,regulation of macromolecule metabolic process,gene expression,regulation of primary metabolic process,regulation of biological process,organic acid biosynthetic process,carboxylic acid biosynthetic process,small molecule metabolic process,small molecule biosynthetic process,multicellular organismal development,single-multicellular organism process,carboxylic acid metabolic process,oxoacid metabolic process,organic acid metabolic process,single-organism metabolic process,multicellular organismal process,intracellular part,single-organism biosynthetic process,system development,nucleobase-containing compound biosynthetic process,intracellular,organic cyclic compound biosynthetic process,aromatic compound biosynthetic process,biological regulation,primary metabolic process,cellular metabolic process,intracellular organelle part,organelle part,shoot system development,regulation of gene expression,developmental process,regulation of cellular metabolic process,cellular biosynthetic process,intracellular organelle,anatomical structure development,organelle,terpenoid biosynthetic process,cellular macromolecule metabolic process,heterocycle biosynthetic process,cellular nitrogen compound biosynthetic process,biosynthetic process,regulation of nucleobase-containing compound metabolic process,lipid metabolic process,terpenoid metabolic process,metabolic process,cell,cell part,organic substance biosynthetic process,regulation of nitrogen compound metabolic process,organic substance metabolic process,leaf development,gibberellin biosynthetic process,cytoplasmic part,regulation of RNA metabolic process,diterpenoid biosynthetic process,regulation of macromolecule biosynthetic process,regulation of cellular macromolecule biosynthetic process,regulation of biosynthetic process,gibberellin metabolic process,phyllome development,regulation of transcription, DNA-dependent,regulation of RNA biosynthetic process,response to oxygen-containing compound,regulation of cellular biosynthetic process,plastid part,macromolecule metabolic process,diterpenoid metabolic process,cytoplasm,cellular response to lipid,chloroplast part,plastid,RNA biosynthetic process,organelle envelope,regulation of cellular process,envelope,chloroplast,lipid biosynthetic process,response to gibberellin stimulus,gibberellic acid mediated signaling pathway,gibberellin mediated signaling pathway,cellular response to gibberellin stimulus,transcription, DNA-dependent,plastid envelope,response to chemical stimulus,cellular macromolecule biosynthetic process,cellular response to oxygen-containing compound,chloroplast envelope,cellular response to organic substance,macromolecule biosynthetic process,single-organism developmental process,cellular lipid metabolic process,single organism signaling,single-organism process,signaling,biological_process,signal transduction,cell communication,hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides,cellular response to chemical stimulus,cellular process,cellular_component,response to stimulus,hydrolase activity, acting on acid anhydrides,ion binding,isoprenoid biosynthetic process,cellular response to stimulus,isoprenoid metabolic process,organic cyclic compound binding,heterocyclic compound binding,binding,hydrolase activity,response to organic substance,single-organism cellular process,response to lipid,hormone-mediated signaling pathway,cellular response to hormone stimulus,cellular response to endogenous stimulus,catalytic activity,response to endogenous stimulus,small molecule binding,nucleotide binding,nucleoside phosphate binding,molecular_function,purine ribonucleoside triphosphate binding,ATP binding,response to hormone stimulus,anion binding,ribonucleotide binding,purine nucleoside binding,purine ribonucleoside binding,purine ribonucleotide binding,purine nucleotide binding,adenyl ribonucleotide binding,adenyl nucleotide binding,ribonucleoside binding,nucleoside binding","--","--"]
["TCONS_00072510","XLOC_053064","2:30586407-30589501",{"v":5e-05,"d":"5.00E-05"},0.00428946,"Novel_lncRNA","co_location","Solyc02g036370.3","GO:0009889,GO:0031326,GO:0031323,GO:0019222,GO:0008150,GO:0050794,GO:0065007,GO:0003677,GO:0050789,GO:0008152,GO:0005488,GO:0050896,GO:0007154,GO:0010600,GO:0090354,GO:0042446,GO:0097159,GO:1901363,GO:0003674,GO:0046885,GO:0009058,GO:0042445,GO:0044237,GO:0032350,GO:0044249,GO:0010817,GO:0003676,GO:0009755,GO:0032870,GO:0071495,GO:0009987,GO:0009851,GO:0044763,GO:0051716,GO:0071310,GO:0007165,GO:0009850,GO:0044699,GO:0044700,GO:0023052,GO:0065008,GO:0003682,GO:0070887,GO:0042221,GO:0009734,GO:0071365,GO:0010033,GO:0009719,GO:0009725,GO:0009733","regulation of biosynthetic process,regulation of cellular biosynthetic process,regulation of cellular metabolic process,regulation of metabolic process,biological_process,regulation of cellular process,biological regulation,DNA binding,regulation of biological process,metabolic process,binding,response to stimulus,cell communication,regulation of auxin biosynthetic process,regulation of auxin metabolic process,hormone biosynthetic process,organic cyclic compound binding,heterocyclic compound binding,molecular_function,regulation of hormone biosynthetic process,biosynthetic process,hormone metabolic process,cellular metabolic process,regulation of hormone metabolic process,cellular biosynthetic process,regulation of hormone levels,nucleic acid binding,hormone-mediated signaling pathway,cellular response to hormone stimulus,cellular response to endogenous stimulus,cellular process,auxin biosynthetic process,single-organism cellular process,cellular response to stimulus,cellular response to organic substance,signal transduction,auxin metabolic process,single-organism process,single organism signaling,signaling,regulation of biological quality,chromatin binding,cellular response to chemical stimulus,response to chemical stimulus,auxin mediated signaling pathway,cellular response to auxin stimulus,response to organic substance,response to endogenous stimulus,response to hormone stimulus,response to auxin stimulus","--","--"]
["TCONS_00150053","XLOC_104931","7:4969119-4970000",{"v":5e-05,"d":"5.00E-05"},0.00428946,"Novel_lncRNA","co_location","Solyc07g014620.2","GO:0009725,GO:0009719,GO:0010033,GO:0050896,GO:0008150,GO:0042221,GO:0009733","response to hormone stimulus,response to endogenous stimulus,response to organic substance,response to stimulus,biological_process,response to chemical stimulus,response to auxin stimulus","sly04075","Plant hormone signal transduction"]
["TCONS_00051510","XLOC_036966","11:681237-683973",0.00015,0.010236,"Novel_lncRNA","co_expression","Solyc03g123550.2","GO:0050896,GO:0009733,GO:0008150,GO:0010033,GO:0042221,GO:0009725,GO:0009719","response to stimulus,response to auxin stimulus,biological_process,response to organic substance,response to chemical stimulus,response to hormone stimulus,response to endogenous stimulus","sly04075","Plant hormone signal transduction"]
["TCONS_00089053","XLOC_062157","3:21563483-21571331",0.0003,0.0170986,"Novel_lncRNA","co_expression","Solyc09g064910.2","GO:0005634,GO:0043231,GO:0043227,GO:0044424,GO:0043229,GO:0043226,GO:0009824,GO:0005622,GO:0005623,GO:0044464,GO:0009691,GO:0065007,GO:0016070,GO:0009690,GO:0016765,GO:0044444,GO:0009536,GO:0008033,GO:0005737,GO:0006399,GO:0006396,GO:0090304,GO:0034470,GO:0034754,GO:0034660,GO:0010817,GO:0010467,GO:0005575,GO:0006139,GO:0003674,GO:0042446,GO:0065008,GO:0006807,GO:0042445,GO:0006725,GO:0008150,GO:0034641,GO:0046483,GO:0009058,GO:1901360,GO:0008152,GO:0009308,GO:0044260,GO:0044249,GO:1901564,GO:0003824,GO:0044237,GO:0043170,GO:0016740,GO:0009987,GO:0071704,GO:0044238","nucleus,intracellular membrane-bounded organelle,membrane-bounded organelle,intracellular part,intracellular organelle,organelle,AMP dimethylallyltransferase activity,intracellular,cell,cell part,cytokinin biosynthetic process,biological regulation,RNA metabolic process,cytokinin metabolic process,transferase activity, transferring alkyl or aryl (other than methyl) groups,cytoplasmic part,plastid,tRNA processing,cytoplasm,tRNA metabolic process,RNA processing,nucleic acid metabolic process,ncRNA processing,cellular hormone metabolic process,ncRNA metabolic process,regulation of hormone levels,gene expression,cellular_component,nucleobase-containing compound metabolic process,molecular_function,hormone biosynthetic process,regulation of biological quality,nitrogen compound metabolic process,hormone metabolic process,cellular aromatic compound metabolic process,biological_process,cellular nitrogen compound metabolic process,heterocycle metabolic process,biosynthetic process,organic cyclic compound metabolic process,metabolic process,amine metabolic process,cellular macromolecule metabolic process,cellular biosynthetic process,organonitrogen compound metabolic process,catalytic activity,cellular metabolic process,macromolecule metabolic process,transferase activity,cellular process,organic substance metabolic process,primary metabolic process","sly00908,sly01110,sly01100","Zeatin biosynthesis,Biosynthesis of secondary metabolites,Metabolic pathways"]
["TCONS_00089053","XLOC_062157","3:21563483-21571331",0.0003,0.0170986,"Novel_lncRNA","co_expression","Solyc07g041720.2","GO:0005634,GO:0043231,GO:0043227,GO:0046872,GO:0043169,GO:0042221,GO:0044424,GO:0010033,GO:0043229,GO:0005618,GO:0043226,GO:0030312,GO:0005622,GO:0050896,GO:0048046,GO:0005576,GO:0009607,GO:0005623,GO:0044464,GO:0006950,GO:0031012,GO:0009719,GO:0009888,GO:0065007,GO:0009725,GO:0030003,GO:0006873,GO:0051707,GO:0043167,GO:0046914,GO:0006091,GO:0010103,GO:0055082,GO:0006952,GO:0010016,GO:0055080,GO:0070838,GO:0072511,GO:0050801,GO:0010374,GO:0051704,GO:0048878,GO:0009653,GO:0042742,GO:0005488,GO:0030145,GO:0009886,GO:0019725,GO:0009735,GO:0008544,GO:0043588,GO:0048367,GO:0019684,GO:0005575,GO:0030001,GO:0009617,GO:0045735,GO:0042592,GO:0044763,GO:0048513,GO:0006810,GO:0009505,GO:0006811,GO:0003674,GO:0071944,GO:0048731,GO:0051234,GO:0044699,GO:0065008,GO:0051179,GO:0044767,GO:0006812,GO:0008150,GO:0015979,GO:0044765,GO:0048856,GO:0008152,GO:0007275,GO:0032502,GO:0009791,GO:0032501,GO:0044707,GO:0044237,GO:0009987","nucleus,intracellular membrane-bounded organelle,membrane-bounded organelle,metal ion binding,cation binding,response to chemical stimulus,intracellular part,response to organic substance,intracellular organelle,cell wall,organelle,external encapsulating structure,intracellular,response to stimulus,apoplast,extracellular region,response to biotic stimulus,cell,cell part,response to stress,extracellular matrix,response to endogenous stimulus,tissue development,biological regulation,response to hormone stimulus,cellular cation homeostasis,cellular ion homeostasis,response to other organism,ion binding,transition metal ion binding,generation of precursor metabolites and energy,stomatal complex morphogenesis,cellular chemical homeostasis,defense response,shoot system morphogenesis,cation homeostasis,divalent metal ion transport,divalent inorganic cation transport,ion homeostasis,stomatal complex development,multi-organism process,chemical homeostasis,anatomical structure morphogenesis,defense response to bacterium,binding,manganese ion binding,post-embryonic morphogenesis,cellular homeostasis,response to cytokinin stimulus,epidermis development,skin development,shoot system development,photosynthesis, light reaction,cellular_component,metal ion transport,response to bacterium,nutrient reservoir activity,homeostatic process,single-organism cellular process,organ development,transport,plant-type cell wall,ion transport,molecular_function,cell periphery,system development,establishment of localization,single-organism process,regulation of biological quality,localization,single-organism developmental process,cation transport,biological_process,photosynthesis,single-organism transport,anatomical structure development,metabolic process,multicellular organismal development,developmental process,post-embryonic development,multicellular organismal process,single-multicellular organism process,cellular metabolic process,cellular process","--","--"]
["TCONS_00003208","XLOC_002621","2:29207131-29208262",0.00105,0.0410637,"Novel_lncRNA","co_expression","Solyc08g008120.3","GO:0008150,GO:0030162,GO:0032434,GO:0032436,GO:0045862,GO:0061136,GO:1901800,GO:0045732,GO:0031331,GO:0009896,GO:0008152,GO:0007154,GO:0042176,GO:0070887,GO:0031329,GO:0009788,GO:1901420,GO:0009787,GO:1901701,GO:0009894,GO:1901419,GO:0042221,GO:1901700,GO:0044238,GO:0071310,GO:0032270,GO:0050896,GO:0051247,GO:0009755,GO:0032870,GO:0009968,GO:0010648,GO:0023057,GO:0071495,GO:0010033,GO:0009966,GO:0048585,GO:0023051,GO:0010646,GO:0007165,GO:0043161,GO:0044700,GO:0009056,GO:0023052,GO:0009057,GO:0071704,GO:1901575,GO:0051716,GO:0010498,GO:0009738,GO:0071215,GO:0009719,GO:0097306,GO:0048583,GO:0048518,GO:0009893,GO:0071396,GO:0009725,GO:0048522,GO:0044699,GO:0006508,GO:0044763,GO:0009987,GO:0010604,GO:0044248,GO:0044237,GO:0009737,GO:0031325,GO:0032268,GO:0050789,GO:0019222,GO:0051246,GO:0097305,GO:0019538,GO:0033993,GO:0065007,GO:0044267,GO:0006511,GO:0031323,GO:0019941,GO:0043632,GO:0005634,GO:0044265,GO:0060255,GO:0051603,GO:0005575,GO:0043231,GO:0043227,GO:0044257,GO:0080090,GO:0050794,GO:0030163,GO:0043170,GO:0044260,GO:0048523,GO:0048519,GO:0043229,GO:0043226,GO:0005623,GO:0044464,GO:0044424,GO:0005622","biological_process,regulation of proteolysis,regulation of proteasomal ubiquitin-dependent protein catabolic process,positive regulation of proteasomal ubiquitin-dependent protein catabolic process,positive regulation of proteolysis,regulation of proteasomal protein catabolic process,positive regulation of proteasomal protein catabolic process,positive regulation of protein catabolic process,positive regulation of cellular catabolic process,positive regulation of catabolic process,metabolic process,cell communication,regulation of protein catabolic process,cellular response to chemical stimulus,regulation of cellular catabolic process,negative regulation of abscisic acid mediated signaling pathway,negative regulation of response to alcohol,regulation of abscisic acid mediated signaling pathway,cellular response to oxygen-containing compound,regulation of catabolic process,regulation of response to alcohol,response to chemical stimulus,response to oxygen-containing compound,primary metabolic process,cellular response to organic substance,positive regulation of cellular protein metabolic process,response to stimulus,positive regulation of protein metabolic process,hormone-mediated signaling pathway,cellular response to hormone stimulus,negative regulation of signal transduction,negative regulation of cell communication,negative regulation of signaling,cellular response to endogenous stimulus,response to organic substance,regulation of signal transduction,negative regulation of response to stimulus,regulation of signaling,regulation of cell communication,signal transduction,proteasomal ubiquitin-dependent protein catabolic process,single organism signaling,catabolic process,signaling,macromolecule catabolic process,organic substance metabolic process,organic substance catabolic process,cellular response to stimulus,proteasomal protein catabolic process,abscisic acid mediated signaling pathway,cellular response to abscisic acid stimulus,response to endogenous stimulus,cellular response to alcohol,regulation of response to stimulus,positive regulation of biological process,positive regulation of metabolic process,cellular response to lipid,response to hormone stimulus,positive regulation of cellular process,single-organism process,proteolysis,single-organism cellular process,cellular process,positive regulation of macromolecule metabolic process,cellular catabolic process,cellular metabolic process,response to abscisic acid stimulus,positive regulation of cellular metabolic process,regulation of cellular protein metabolic process,regulation of biological process,regulation of metabolic process,regulation of protein metabolic process,response to alcohol,protein metabolic process,response to lipid,biological regulation,cellular protein metabolic process,ubiquitin-dependent protein catabolic process,regulation of cellular metabolic process,modification-dependent protein catabolic process,modification-dependent macromolecule catabolic process,nucleus,cellular macromolecule catabolic process,regulation of macromolecule metabolic process,proteolysis involved in cellular protein catabolic process,cellular_component,intracellular membrane-bounded organelle,membrane-bounded organelle,cellular protein catabolic process,regulation of primary metabolic process,regulation of cellular process,protein catabolic process,macromolecule metabolic process,cellular macromolecule metabolic process,negative regulation of cellular process,negative regulation of biological process,intracellular organelle,organelle,cell,cell part,intracellular part,intracellular","--","--"]
["TCONS_00129734","XLOC_090571","9:11309985-11312281",0.00095,0.0384387,"Novel_lncRNA","co_location","Solyc09g015830.2","GO:0016020,GO:0048585,GO:0006007,GO:0019320,GO:0046365,GO:0010483,GO:0030308,GO:0043680,GO:0051703,GO:0019318,GO:0006006,GO:0044724,GO:0005996,GO:0046777,GO:0009741,GO:0044426,GO:0005886,GO:0009788,GO:0006091,GO:1901420,GO:0006096,GO:0007030,GO:0014070,GO:0010193,GO:0032870,GO:0071495,GO:0009787,GO:0097306,GO:0045926,GO:1901419,GO:0044462,GO:0097305,GO:0006833,GO:0042044,GO:0009653,GO:0048583,GO:0016052,GO:0046686,GO:0033993,GO:1901701,GO:0048856,GO:0071944,GO:0032989,GO:0071396,GO:0009755,GO:0007165,GO:0016310,GO:0009968,GO:0010648,GO:0023057,GO:0071215,GO:0009056,GO:0009966,GO:0016773,GO:0023051,GO:0044700,GO:0023052,GO:0010646,GO:0044767,GO:0004672,GO:0007275,GO:0006468,GO:0009737,GO:0005575,GO:0048588,GO:0006972,GO:0016301,GO:0009725,GO:0010038,GO:0032502,GO:0048589,GO:0009791,GO:0007154,GO:1901575,GO:0060560,GO:0021700,GO:0071310,GO:0008544,GO:0043588,GO:0016772,GO:0022414,GO:0009719,GO:0009888,GO:0044707,GO:0032501,GO:0000902,GO:0048513,GO:0044765,GO:0016049,GO:0048731,GO:0000003,GO:0006796,GO:0009738,GO:0043168,GO:0000166,GO:1901265,GO:0036094,GO:0044723,GO:0006810,GO:0048869,GO:0006793,GO:0051234,GO:0070887,GO:0005488,GO:0048764,GO:0048765,GO:0009250,GO:0048469,GO:0004674,GO:0009628,GO:0048767,GO:0010054,GO:0050832,GO:0051179,GO:0022622,GO:0048364,GO:0010053,GO:0001558,GO:0048468,GO:0044267,GO:0005524,GO:0009266,GO:0030154,GO:0044262,GO:0003674,GO:0040007,GO:0000271,GO:0009651,GO:0035639,GO:0051716,GO:0033692,GO:0051707,GO:0048519,GO:0005975,GO:0009856,GO:0044703,GO:0044706,GO:0044237,GO:0010033,GO:0019538,GO:0008152,GO:0071840,GO:1901700,GO:0065007,GO:0005623,GO:0044464,GO:0050789,GO:0006073,GO:0044042,GO:0006464,GO:0036211,GO:0016051,GO:0005618,GO:0016043,GO:0006952,GO:0030312,GO:0034637,GO:0040008,GO:0006970,GO:0044264,GO:0032553,GO:0044699,GO:0008150,GO:0010015,GO:0097159,GO:1901363,GO:0032559,GO:0009620,GO:0030554,GO:0043412,GO:0032549,GO:0001882,GO:0051704,GO:0016740,GO:0001883,GO:0032550,GO:0032555,GO:0009723,GO:0051128,GO:0009913,GO:0017076,GO:0030855,GO:0060429,GO:0009987,GO:0009607,GO:0005911,GO:0009506,GO:0030054,GO:0055044,GO:0048523,GO:0050896,GO:0006996,GO:0016192,GO:0030244,GO:0046907,GO:0005976,GO:0051641,GO:0051274,GO:0003824,GO:0043167,GO:0051649,GO:0042221,GO:0009059,GO:0044260,GO:0050794,GO:0044763,GO:0034645,GO:0030243,GO:0071704,GO:0044249,GO:0044238,GO:0051273,GO:0009058,GO:0000302,GO:0043170,GO:1901576,GO:0048193,GO:0006979,GO:0006950,GO:0010035","membrane,negative regulation of response to stimulus,glucose catabolic process,hexose catabolic process,monosaccharide catabolic process,pollen tube reception,negative regulation of cell growth,filiform apparatus,intraspecies interaction between organisms,hexose metabolic process,glucose metabolic process,single-organism carbohydrate catabolic process,monosaccharide metabolic process,protein autophosphorylation,response to brassinosteroid stimulus,cell wall part,plasma membrane,negative regulation of abscisic acid mediated signaling pathway,generation of precursor metabolites and energy,negative regulation of response to alcohol,glycolysis,Golgi organization,response to organic cyclic compound,response to ozone,cellular response to hormone stimulus,cellular response to endogenous stimulus,regulation of abscisic acid mediated signaling pathway,cellular response to alcohol,negative regulation of growth,regulation of response to alcohol,external encapsulating structure part,response to alcohol,water transport,fluid transport,anatomical structure morphogenesis,regulation of response to stimulus,carbohydrate catabolic process,response to cadmium ion,response to lipid,cellular response to oxygen-containing compound,anatomical structure development,cell periphery,cellular component morphogenesis,cellular response to lipid,hormone-mediated signaling pathway,signal transduction,phosphorylation,negative regulation of signal transduction,negative regulation of cell communication,negative regulation of signaling,cellular response to abscisic acid stimulus,catabolic process,regulation of signal transduction,phosphotransferase activity, alcohol group as acceptor,regulation of signaling,single organism signaling,signaling,regulation of cell communication,single-organism developmental process,protein kinase activity,multicellular organismal development,protein phosphorylation,response to abscisic acid stimulus,cellular_component,developmental cell growth,hyperosmotic response,kinase activity,response to hormone stimulus,response to metal ion,developmental process,developmental growth,post-embryonic development,cell communication,organic substance catabolic process,developmental growth involved in morphogenesis,developmental maturation,cellular response to organic substance,epidermis development,skin development,transferase activity, transferring phosphorus-containing groups,reproductive process,response to endogenous stimulus,tissue development,single-multicellular organism process,multicellular organismal process,cell morphogenesis,organ development,single-organism transport,cell growth,system development,reproduction,phosphate-containing compound metabolic process,abscisic acid mediated signaling pathway,anion binding,nucleotide binding,nucleoside phosphate binding,small molecule binding,single-organism carbohydrate metabolic process,transport,cellular developmental process,phosphorus metabolic process,establishment of localization,cellular response to chemical stimulus,binding,trichoblast maturation,root hair cell differentiation,glucan biosynthetic process,cell maturation,protein serine/threonine kinase activity,response to abiotic stimulus,root hair elongation,trichoblast differentiation,defense response to fungus,localization,root system development,root development,root epidermal cell differentiation,regulation of cell growth,cell development,cellular protein metabolic process,ATP binding,response to temperature stimulus,cell differentiation,cellular carbohydrate metabolic process,molecular_function,growth,polysaccharide biosynthetic process,response to salt stress,purine ribonucleoside triphosphate binding,cellular response to stimulus,cellular polysaccharide biosynthetic process,response to other organism,negative regulation of biological process,carbohydrate metabolic process,pollination,multi-organism reproductive process,multi-multicellular organism process,cellular metabolic process,response to organic substance,protein metabolic process,metabolic process,cellular component organization or biogenesis,response to oxygen-containing compound,biological regulation,cell,cell part,regulation of biological process,cellular glucan metabolic process,glucan metabolic process,cellular protein modification process,protein modification process,carbohydrate biosynthetic process,cell wall,cellular component organization,defense response,external encapsulating structure,cellular carbohydrate biosynthetic process,regulation of growth,response to osmotic stress,cellular polysaccharide metabolic process,ribonucleotide binding,single-organism process,biological_process,root morphogenesis,organic cyclic compound binding,heterocyclic compound binding,adenyl ribonucleotide binding,response to fungus,adenyl nucleotide binding,macromolecule modification,ribonucleoside binding,nucleoside binding,multi-organism process,transferase activity,purine nucleoside binding,purine ribonucleoside binding,purine ribonucleotide binding,response to ethylene stimulus,regulation of cellular component organization,epidermal cell differentiation,purine nucleotide binding,epithelial cell differentiation,epithelium development,cellular process,response to biotic stimulus,cell-cell junction,plasmodesma,cell junction,symplast,negative regulation of cellular process,response to stimulus,organelle organization,vesicle-mediated transport,cellulose biosynthetic process,intracellular transport,polysaccharide metabolic process,cellular localization,beta-glucan biosynthetic process,catalytic activity,ion binding,establishment of localization in cell,response to chemical stimulus,macromolecule biosynthetic process,cellular macromolecule metabolic process,regulation of cellular process,single-organism cellular process,cellular macromolecule biosynthetic process,cellulose metabolic process,organic substance metabolic process,cellular biosynthetic process,primary metabolic process,beta-glucan metabolic process,biosynthetic process,response to reactive oxygen species,macromolecule metabolic process,organic substance biosynthetic process,Golgi vesicle transport,response to oxidative stress,response to stress,response to inorganic substance","--","--"]
["TCONS_00112475","XLOC_078097","4:64580144-64584362",0.0004,0.02096,"Novel_lncRNA","co_location","Solyc04g080240.3","GO:0009737,GO:0097305,GO:0033993,GO:0009725,GO:0009719,GO:0010033,GO:0050896,GO:0008150,GO:1901700,GO:0003674,GO:0042221,GO:0005515,GO:0005488","response to abscisic acid stimulus,response to alcohol,response to lipid,response to hormone stimulus,response to endogenous stimulus,response to organic substance,response to stimulus,biological_process,response to oxygen-containing compound,molecular_function,response to chemical stimulus,protein binding,binding","--","--"]
["TCONS_00198715","XLOC_141918","1:78853241-78855881",0.0005,0.0246005,"Novel_lncRNA","co_expression","Solyc01g108210.3","GO:0010295,GO:0044710,GO:0016491,GO:0016705,GO:0055114,GO:0046872,GO:0043169,GO:0008152,GO:0020037,GO:0004497,GO:0016709,GO:0046906,GO:0046914,GO:0008150,GO:0003824,GO:0005506,GO:0097159,GO:1901363,GO:0005488,GO:0043167,GO:0003674","(+)-abscisic acid 8'-hydroxylase activity,single-organism metabolic process,oxidoreductase activity,oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen,oxidation-reduction process,metal ion binding,cation binding,metabolic process,heme binding,monooxygenase activity,oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen,tetrapyrrole binding,transition metal ion binding,biological_process,catalytic activity,iron ion binding,organic cyclic compound binding,heterocyclic compound binding,binding,ion binding,molecular_function","sly00906","Carotenoid biosynthesis"]
["TCONS_00129734","XLOC_090571","9:11309985-11312281",0.00095,0.0384387,"Novel_lncRNA","co_location","Solyc09g015830.2","GO:0016020,GO:0048585,GO:0006007,GO:0019320,GO:0046365,GO:0010483,GO:0030308,GO:0043680,GO:0051703,GO:0019318,GO:0006006,GO:0044724,GO:0005996,GO:0046777,GO:0009741,GO:0044426,GO:0005886,GO:0009788,GO:0006091,GO:1901420,GO:0006096,GO:0007030,GO:0014070,GO:0010193,GO:0032870,GO:0071495,GO:0009787,GO:0097306,GO:0045926,GO:1901419,GO:0044462,GO:0097305,GO:0006833,GO:0042044,GO:0009653,GO:0048583,GO:0016052,GO:0046686,GO:0033993,GO:1901701,GO:0048856,GO:0071944,GO:0032989,GO:0071396,GO:0009755,GO:0007165,GO:0016310,GO:0009968,GO:0010648,GO:0023057,GO:0071215,GO:0009056,GO:0009966,GO:0016773,GO:0023051,GO:0044700,GO:0023052,GO:0010646,GO:0044767,GO:0004672,GO:0007275,GO:0006468,GO:0009737,GO:0005575,GO:0048588,GO:0006972,GO:0016301,GO:0009725,GO:0010038,GO:0032502,GO:0048589,GO:0009791,GO:0007154,GO:1901575,GO:0060560,GO:0021700,GO:0071310,GO:0008544,GO:0043588,GO:0016772,GO:0022414,GO:0009719,GO:0009888,GO:0044707,GO:0032501,GO:0000902,GO:0048513,GO:0044765,GO:0016049,GO:0048731,GO:0000003,GO:0006796,GO:0009738,GO:0043168,GO:0000166,GO:1901265,GO:0036094,GO:0044723,GO:0006810,GO:0048869,GO:0006793,GO:0051234,GO:0070887,GO:0005488,GO:0048764,GO:0048765,GO:0009250,GO:0048469,GO:0004674,GO:0009628,GO:0048767,GO:0010054,GO:0050832,GO:0051179,GO:0022622,GO:0048364,GO:0010053,GO:0001558,GO:0048468,GO:0044267,GO:0005524,GO:0009266,GO:0030154,GO:0044262,GO:0003674,GO:0040007,GO:0000271,GO:0009651,GO:0035639,GO:0051716,GO:0033692,GO:0051707,GO:0048519,GO:0005975,GO:0009856,GO:0044703,GO:0044706,GO:0044237,GO:0010033,GO:0019538,GO:0008152,GO:0071840,GO:1901700,GO:0065007,GO:0005623,GO:0044464,GO:0050789,GO:0006073,GO:0044042,GO:0006464,GO:0036211,GO:0016051,GO:0005618,GO:0016043,GO:0006952,GO:0030312,GO:0034637,GO:0040008,GO:0006970,GO:0044264,GO:0032553,GO:0044699,GO:0008150,GO:0010015,GO:0097159,GO:1901363,GO:0032559,GO:0009620,GO:0030554,GO:0043412,GO:0032549,GO:0001882,GO:0051704,GO:0016740,GO:0001883,GO:0032550,GO:0032555,GO:0009723,GO:0051128,GO:0009913,GO:0017076,GO:0030855,GO:0060429,GO:0009987,GO:0009607,GO:0005911,GO:0009506,GO:0030054,GO:0055044,GO:0048523,GO:0050896,GO:0006996,GO:0016192,GO:0030244,GO:0046907,GO:0005976,GO:0051641,GO:0051274,GO:0003824,GO:0043167,GO:0051649,GO:0042221,GO:0009059,GO:0044260,GO:0050794,GO:0044763,GO:0034645,GO:0030243,GO:0071704,GO:0044249,GO:0044238,GO:0051273,GO:0009058,GO:0000302,GO:0043170,GO:1901576,GO:0048193,GO:0006979,GO:0006950,GO:0010035","membrane,negative regulation of response to stimulus,glucose catabolic process,hexose catabolic process,monosaccharide catabolic process,pollen tube reception,negative regulation of cell growth,filiform apparatus,intraspecies interaction between organisms,hexose metabolic process,glucose metabolic process,single-organism carbohydrate catabolic process,monosaccharide metabolic process,protein autophosphorylation,response to brassinosteroid stimulus,cell wall part,plasma membrane,negative regulation of abscisic acid mediated signaling pathway,generation of precursor metabolites and energy,negative regulation of response to alcohol,glycolysis,Golgi organization,response to organic cyclic compound,response to ozone,cellular response to hormone stimulus,cellular response to endogenous stimulus,regulation of abscisic acid mediated signaling pathway,cellular response to alcohol,negative regulation of growth,regulation of response to alcohol,external encapsulating structure part,response to alcohol,water transport,fluid transport,anatomical structure morphogenesis,regulation of response to stimulus,carbohydrate catabolic process,response to cadmium ion,response to lipid,cellular response to oxygen-containing compound,anatomical structure development,cell periphery,cellular component morphogenesis,cellular response to lipid,hormone-mediated signaling pathway,signal transduction,phosphorylation,negative regulation of signal transduction,negative regulation of cell communication,negative regulation of signaling,cellular response to abscisic acid stimulus,catabolic process,regulation of signal transduction,phosphotransferase activity, alcohol group as acceptor,regulation of signaling,single organism signaling,signaling,regulation of cell communication,single-organism developmental process,protein kinase activity,multicellular organismal development,protein phosphorylation,response to abscisic acid stimulus,cellular_component,developmental cell growth,hyperosmotic response,kinase activity,response to hormone stimulus,response to metal ion,developmental process,developmental growth,post-embryonic development,cell communication,organic substance catabolic process,developmental growth involved in morphogenesis,developmental maturation,cellular response to organic substance,epidermis development,skin development,transferase activity, transferring phosphorus-containing groups,reproductive process,response to endogenous stimulus,tissue development,single-multicellular organism process,multicellular organismal process,cell morphogenesis,organ development,single-organism transport,cell growth,system development,reproduction,phosphate-containing compound metabolic process,abscisic acid mediated signaling pathway,anion binding,nucleotide binding,nucleoside phosphate binding,small molecule binding,single-organism carbohydrate metabolic process,transport,cellular developmental process,phosphorus metabolic process,establishment of localization,cellular response to chemical stimulus,binding,trichoblast maturation,root hair cell differentiation,glucan biosynthetic process,cell maturation,protein serine/threonine kinase activity,response to abiotic stimulus,root hair elongation,trichoblast differentiation,defense response to fungus,localization,root system development,root development,root epidermal cell differentiation,regulation of cell growth,cell development,cellular protein metabolic process,ATP binding,response to temperature stimulus,cell differentiation,cellular carbohydrate metabolic process,molecular_function,growth,polysaccharide biosynthetic process,response to salt stress,purine ribonucleoside triphosphate binding,cellular response to stimulus,cellular polysaccharide biosynthetic process,response to other organism,negative regulation of biological process,carbohydrate metabolic process,pollination,multi-organism reproductive process,multi-multicellular organism process,cellular metabolic process,response to organic substance,protein metabolic process,metabolic process,cellular component organization or biogenesis,response to oxygen-containing compound,biological regulation,cell,cell part,regulation of biological process,cellular glucan metabolic process,glucan metabolic process,cellular protein modification process,protein modification process,carbohydrate biosynthetic process,cell wall,cellular component organization,defense response,external encapsulating structure,cellular carbohydrate biosynthetic process,regulation of growth,response to osmotic stress,cellular polysaccharide metabolic process,ribonucleotide binding,single-organism process,biological_process,root morphogenesis,organic cyclic compound binding,heterocyclic compound binding,adenyl ribonucleotide binding,response to fungus,adenyl nucleotide binding,macromolecule modification,ribonucleoside binding,nucleoside binding,multi-organism process,transferase activity,purine nucleoside binding,purine ribonucleoside binding,purine ribonucleotide binding,response to ethylene stimulus,regulation of cellular component organization,epidermal cell differentiation,purine nucleotide binding,epithelial cell differentiation,epithelium development,cellular process,response to biotic stimulus,cell-cell junction,plasmodesma,cell junction,symplast,negative regulation of cellular process,response to stimulus,organelle organization,vesicle-mediated transport,cellulose biosynthetic process,intracellular transport,polysaccharide metabolic process,cellular localization,beta-glucan biosynthetic process,catalytic activity,ion binding,establishment of localization in cell,response to chemical stimulus,macromolecule biosynthetic process,cellular macromolecule metabolic process,regulation of cellular process,single-organism cellular process,cellular macromolecule biosynthetic process,cellulose metabolic process,organic substance metabolic process,cellular biosynthetic process,primary metabolic process,beta-glucan metabolic process,biosynthetic process,response to reactive oxygen species,macromolecule metabolic process,organic substance biosynthetic process,Golgi vesicle transport,response to oxidative stress,response to stress,response to inorganic substance","--","--"]
["TCONS_00080691","XLOC_057512","2:27199314-27199723",{"v":5e-05,"d":"5.00E-05"},0.00428946,"Novel_lncRNA","co_expression","Solyc04g015700.2","GO:0006984,GO:0034976,GO:0042221,GO:0010033,GO:0007165,GO:0030968,GO:0050896,GO:0006986,GO:0034620,GO:0035967,GO:0044700,GO:0023052,GO:0009607,GO:0006950,GO:0007154,GO:0035966,GO:0010200,GO:0009719,GO:1901701,GO:0010243,GO:0050789,GO:0051716,GO:0065007,GO:0071310,GO:0050794,GO:0009725,GO:1901700,GO:0051707,GO:0009738,GO:0071215,GO:0070887,GO:0016053,GO:0046394,GO:0009737,GO:1901698,GO:0097306,GO:0051704,GO:0033554,GO:0071396,GO:0072330,GO:0097305,GO:0033993,GO:0009695,GO:0044711,GO:0009620,GO:0009694,GO:0044283,GO:0044763,GO:0044710,GO:0035556,GO:0009755,GO:0032870,GO:0071495,GO:0009611,GO:0044699,GO:0019752,GO:0043436,GO:0006082,GO:0009753,GO:0008150,GO:0044281,GO:0009058,GO:0008152,GO:0044249,GO:1901576,GO:0044237,GO:0032787,GO:0009987,GO:0071704","ER-nucleus signaling pathway,response to endoplasmic reticulum stress,response to chemical stimulus,response to organic substance,signal transduction,endoplasmic reticulum unfolded protein response,response to stimulus,response to unfolded protein,cellular response to unfolded protein,cellular response to topologically incorrect protein,single organism signaling,signaling,response to biotic stimulus,response to stress,cell communication,response to topologically incorrect protein,response to chitin,response to endogenous stimulus,cellular response to oxygen-containing compound,response to organonitrogen compound,regulation of biological process,cellular response to stimulus,biological regulation,cellular response to organic substance,regulation of cellular process,response to hormone stimulus,response to oxygen-containing compound,response to other organism,abscisic acid mediated signaling pathway,cellular response to abscisic acid stimulus,cellular response to chemical stimulus,organic acid biosynthetic process,carboxylic acid biosynthetic process,response to abscisic acid stimulus,response to nitrogen compound,cellular response to alcohol,multi-organism process,cellular response to stress,cellular response to lipid,monocarboxylic acid biosynthetic process,response to alcohol,response to lipid,jasmonic acid biosynthetic process,single-organism biosynthetic process,response to fungus,jasmonic acid metabolic process,small molecule biosynthetic process,single-organism cellular process,single-organism metabolic process,intracellular signal transduction,hormone-mediated signaling pathway,cellular response to hormone stimulus,cellular response to endogenous stimulus,response to wounding,single-organism process,carboxylic acid metabolic process,oxoacid metabolic process,organic acid metabolic process,response to jasmonic acid stimulus,biological_process,small molecule metabolic process,biosynthetic process,metabolic process,cellular biosynthetic process,organic substance biosynthetic process,cellular metabolic process,monocarboxylic acid metabolic process,cellular process,organic substance metabolic process","--","--"]
["TCONS_00182550","XLOC_129105","9:15046955-15049251",0.0005,0.0246005,"Novel_lncRNA","co_location","Solyc09g018510.3","GO:0072593,GO:0042743,GO:0052668,GO:0052669,GO:0052670,GO:0052671,GO:0052673,GO:0016487,GO:0034308,GO:0050665,GO:0016926,GO:0016020,GO:0007275,GO:0048856,GO:0009791,GO:0032502,GO:0003006,GO:0048513,GO:0044707,GO:0032501,GO:0048731,GO:0044699,GO:0070646,GO:0044767,GO:0010228,GO:0070647,GO:0048608,GO:0061458,GO:0009908,GO:0006714,GO:0048367,GO:0022414,GO:0000003,GO:0044710,GO:0048569,GO:0016772,GO:0044255,GO:0048437,GO:0006066,GO:0006721,GO:0050896,GO:0006629,GO:0009737,GO:0006720,GO:0005575,GO:0044281,GO:0008152,GO:1901615,GO:0097305,GO:0016773,GO:0009987,GO:0016740,GO:1901700,GO:0033993,GO:0003824,GO:0008150,GO:0048440,GO:0009725,GO:0048467,GO:0048827,GO:0003674,GO:0009719,GO:0006464,GO:0036211,GO:0044249,GO:0048438,GO:0043412,GO:0009058,GO:0044237,GO:0010033,GO:0044267,GO:0042221,GO:0043170,GO:0044260,GO:0019538,GO:0044238,GO:0071704","reactive oxygen species metabolic process,hydrogen peroxide metabolic process,farnesol kinase activity,CTP:2-trans,-6-trans-farnesol kinase activity,geraniol kinase activity,geranylgeraniol kinase activity,prenol kinase activity,farnesol metabolic process,primary alcohol metabolic process,hydrogen peroxide biosynthetic process,protein desumoylation,membrane,multicellular organismal development,anatomical structure development,post-embryonic development,developmental process,developmental process involved in reproduction,organ development,single-multicellular organism process,multicellular organismal process,system development,single-organism process,protein modification by small protein removal,single-organism developmental process,vegetative to reproductive phase transition of meristem,protein modification by small protein conjugation or removal,reproductive structure development,reproductive system development,flower development,sesquiterpenoid metabolic process,shoot system development,reproductive process,reproduction,single-organism metabolic process,post-embryonic organ development,transferase activity, transferring phosphorus-containing groups,cellular lipid metabolic process,floral organ development,alcohol metabolic process,terpenoid metabolic process,response to stimulus,lipid metabolic process,response to abscisic acid stimulus,isoprenoid metabolic process,cellular_component,small molecule metabolic process,metabolic process,organic hydroxy compound metabolic process,response to alcohol,phosphotransferase activity, alcohol group as acceptor,cellular process,transferase activity,response to oxygen-containing compound,response to lipid,catalytic activity,biological_process,carpel development,response to hormone stimulus,gynoecium development,phyllome development,molecular_function,response to endogenous stimulus,cellular protein modification process,protein modification process,cellular biosynthetic process,floral whorl development,macromolecule modification,biosynthetic process,cellular metabolic process,response to organic substance,cellular protein metabolic process,response to chemical stimulus,macromolecule metabolic process,cellular macromolecule metabolic process,protein metabolic process,primary metabolic process,organic substance metabolic process","sly00900","Terpenoid backbone biosynthesis"]
["TCONS_00185283","XLOC_131614","9:49144847-49147432",0.0009,0.0369684,"Novel_lncRNA","co_location","Solyc09g056450.3","GO:0046777,GO:0032870,GO:0071495,GO:0097306,GO:0097305,GO:0033993,GO:1901701,GO:0071396,GO:0016310,GO:0071215,GO:0006468,GO:0009737,GO:0009725,GO:0070647,GO:0071310,GO:0009719,GO:0005515,GO:0006796,GO:0006793,GO:0070887,GO:0005488,GO:0016567,GO:0044267,GO:0032446,GO:0003674,GO:0051716,GO:0044237,GO:0010033,GO:0019538,GO:0008152,GO:1901700,GO:0006464,GO:0036211,GO:0044699,GO:0008150,GO:0043412,GO:0016879,GO:0009987,GO:0004842,GO:0050896,GO:0019787,GO:0003824,GO:0016881,GO:0042221,GO:0044260,GO:0044763,GO:0071704,GO:0044238,GO:0043170,GO:0016874","protein autophosphorylation,cellular response to hormone stimulus,cellular response to endogenous stimulus,cellular response to alcohol,response to alcohol,response to lipid,cellular response to oxygen-containing compound,cellular response to lipid,phosphorylation,cellular response to abscisic acid stimulus,protein phosphorylation,response to abscisic acid stimulus,response to hormone stimulus,protein modification by small protein conjugation or removal,cellular response to organic substance,response to endogenous stimulus,protein binding,phosphate-containing compound metabolic process,phosphorus metabolic process,cellular response to chemical stimulus,binding,protein ubiquitination,cellular protein metabolic process,protein modification by small protein conjugation,molecular_function,cellular response to stimulus,cellular metabolic process,response to organic substance,protein metabolic process,metabolic process,response to oxygen-containing compound,cellular protein modification process,protein modification process,single-organism process,biological_process,macromolecule modification,ligase activity, forming carbon-nitrogen bonds,cellular process,ubiquitin-protein ligase activity,response to stimulus,small conjugating protein ligase activity,catalytic activity,acid-amino acid ligase activity,response to chemical stimulus,cellular macromolecule metabolic process,single-organism cellular process,organic substance metabolic process,primary metabolic process,macromolecule metabolic process,ligase activity","--","--"]
["TCONS_00116724","XLOC_081495","4:7798911-7799928",{"v":5e-05,"d":"5.00E-05"},0.00428946,"Novel_lncRNA","co_expression","Solyc03g007070.3","GO:0030170,GO:0048037,GO:0044710,GO:0009692,GO:0009693,GO:0043449,GO:0043450,GO:1900673,GO:1900674,GO:0019752,GO:0044281,GO:0043436,GO:0006082,GO:0006520,GO:0043167,GO:0005488,GO:0009058,GO:0003824,GO:0044249,GO:0008483,GO:0016769,GO:1901576,GO:0008793,GO:0008152,GO:0016740,GO:0043168,GO:0003674,GO:0006807,GO:0071704,GO:0044237,GO:1901564,GO:0044238,GO:0008150,GO:0004069,GO:0009987","pyridoxal phosphate binding,cofactor binding,single-organism metabolic process,ethylene metabolic process,ethylene biosynthetic process,cellular alkene metabolic process,alkene biosynthetic process,olefin metabolic process,olefin biosynthetic process,carboxylic acid metabolic process,small molecule metabolic process,oxoacid metabolic process,organic acid metabolic process,cellular amino acid metabolic process,ion binding,binding,biosynthetic process,catalytic activity,cellular biosynthetic process,transaminase activity,transferase activity, transferring nitrogenous groups,organic substance biosynthetic process,aromatic-amino-acid:2-oxoglutarate aminotransferase activity,metabolic process,transferase activity,anion binding,molecular_function,nitrogen compound metabolic process,organic substance metabolic process,cellular metabolic process,organonitrogen compound metabolic process,primary metabolic process,biological_process,L-aspartate:2-oxoglutarate aminotransferase activity,cellular process","--","--"]
["TCONS_00187677","XLOC_133373","7:4964553-4964980",{"v":5e-05,"d":"5.00E-05"},0.00428946,"Novel_lncRNA","co_expression","Solyc09g089580.3","GO:0019842,GO:0031406,GO:0046872,GO:0043169,GO:0031418,GO:0051213,GO:0016706,GO:0048029,GO:0016705,GO:0016491,GO:0009835,GO:0071695,GO:0043167,GO:0055114,GO:0009692,GO:0009693,GO:0043449,GO:0043450,GO:1900673,GO:1900674,GO:0021700,GO:0005488,GO:0030246,GO:0010154,GO:0007568,GO:0044710,GO:0003674,GO:0048731,GO:0044699,GO:0044767,GO:0008150,GO:0000003,GO:0009058,GO:0048856,GO:0048608,GO:0061458,GO:0008152,GO:0003006,GO:0007275,GO:0043168,GO:0032502,GO:0044249,GO:0032501,GO:1901576,GO:0022414,GO:0044707,GO:0003824,GO:0044237,GO:0036094,GO:0009987,GO:0071704","vitamin binding,carboxylic acid binding,metal ion binding,cation binding,L-ascorbic acid binding,dioxygenase activity,oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors,monosaccharide binding,oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen,oxidoreductase activity,fruit ripening,anatomical structure maturation,ion binding,oxidation-reduction process,ethylene metabolic process,ethylene biosynthetic process,cellular alkene metabolic process,alkene biosynthetic process,olefin metabolic process,olefin biosynthetic process,developmental maturation,binding,carbohydrate binding,fruit development,aging,single-organism metabolic process,molecular_function,system development,single-organism process,single-organism developmental process,biological_process,reproduction,biosynthetic process,anatomical structure development,reproductive structure development,reproductive system development,metabolic process,developmental process involved in reproduction,multicellular organismal development,anion binding,developmental process,cellular biosynthetic process,multicellular organismal process,organic substance biosynthetic process,reproductive process,single-multicellular organism process,catalytic activity,cellular metabolic process,small molecule binding,cellular process,organic substance metabolic process","--","--"]
["TCONS_00144683","XLOC_101626","10:51172315-51172704",0.0001,0.00749528,"Novel_lncRNA","co_expression","Solyc09g008720.2","GO:0003824,GO:0008150,GO:0003674,GO:0007154,GO:0016773,GO:0016020,GO:0004672,GO:0016301,GO:0016740,GO:0000155,GO:0004673,GO:0016775,GO:0050896,GO:0007165,GO:0016772,GO:0044700,GO:0023052,GO:0051716,GO:0038023,GO:0004872,GO:0044699,GO:0044763,GO:0009987,GO:0004871,GO:0060089,GO:0050789,GO:0065007,GO:0005575,GO:0050794","catalytic activity,biological_process,molecular_function,cell communication,phosphotransferase activity, alcohol group as acceptor,membrane,protein kinase activity,kinase activity,transferase activity,phosphorelay sensor kinase activity,protein histidine kinase activity,phosphotransferase activity, nitrogenous group as acceptor,response to stimulus,signal transduction,transferase activity, transferring phosphorus-containing groups,single organism signaling,signaling,cellular response to stimulus,signaling receptor activity,receptor activity,single-organism process,single-organism cellular process,cellular process,signal transducer activity,molecular transducer activity,regulation of biological process,biological regulation,cellular_component,regulation of cellular process","--","--"]
["TCONS_00002500","XLOC_001983","12:3954862-3955356",{"v":5e-05,"d":"5.00E-05"},0.00428946,"Novel_lncRNA","co_expression","Solyc11g042560.2","GO:0008152,GO:0008150,GO:0003674,GO:0071704,GO:0019222,GO:0044238,GO:0044237,GO:0031323,GO:0001071,GO:0003700,GO:0006355,GO:2001141,GO:0051252,GO:0009889,GO:0010556,GO:2000112,GO:0010468,GO:0019219,GO:0031326,GO:0051171,GO:0080090,GO:0009987,GO:0006351,GO:0032774,GO:0065007,GO:0060255,GO:0050789,GO:1901362,GO:0044271,GO:0018130,GO:0034654,GO:0019438,GO:0050794,GO:0097159,GO:1901363,GO:0043170,GO:0005488,GO:0009058,GO:0003677,GO:0016070,GO:1901576,GO:0006807,GO:0009059,GO:0044249,GO:0044260,GO:1901360,GO:0090304,GO:0034645,GO:0006725,GO:0010467,GO:0034641,GO:0046483,GO:0006139,GO:0003676","metabolic process,biological_process,molecular_function,organic substance metabolic process,regulation of metabolic process,primary metabolic process,cellular metabolic process,regulation of cellular metabolic process,nucleic acid binding transcription factor activity,sequence-specific DNA binding transcription factor activity,regulation of transcription, DNA-dependent,regulation of RNA biosynthetic process,regulation of RNA metabolic process,regulation of biosynthetic process,regulation of macromolecule biosynthetic process,regulation of cellular macromolecule biosynthetic process,regulation of gene expression,regulation of nucleobase-containing compound metabolic process,regulation of cellular biosynthetic process,regulation of nitrogen compound metabolic process,regulation of primary metabolic process,cellular process,transcription, DNA-dependent,RNA biosynthetic process,biological regulation,regulation of macromolecule metabolic process,regulation of biological process,organic cyclic compound biosynthetic process,cellular nitrogen compound biosynthetic process,heterocycle biosynthetic process,nucleobase-containing compound biosynthetic process,aromatic compound biosynthetic process,regulation of cellular process,organic cyclic compound binding,heterocyclic compound binding,macromolecule metabolic process,binding,biosynthetic process,DNA binding,RNA metabolic process,organic substance biosynthetic process,nitrogen compound metabolic process,macromolecule biosynthetic process,cellular biosynthetic process,cellular macromolecule metabolic process,organic cyclic compound metabolic process,nucleic acid metabolic process,cellular macromolecule biosynthetic process,cellular aromatic compound metabolic process,gene expression,cellular nitrogen compound metabolic process,heterocycle metabolic process,nucleobase-containing compound metabolic process,nucleic acid binding","--","--"]
[]
["cell wall related"]
["transcript_id","gene_id","gene_location","pvalue","qvalue","Status","Target_prediction_method","Target_gene_id","Target_GO_id","Target_GO_description","Target_KO_id","Target_KO_description"]
["TCONS_00123348","XLOC_085779","7:44222716-44225120",{"v":5e-05,"d":"5.00E-05"},0.00428946,"Novel_lncRNA","co_expression","Solyc05g056110.3","GO:0003824,GO:0003676,GO:0016787,GO:0003674,GO:0046872,GO:0043169,GO:0043167,GO:0005488,GO:0030145,GO:0097159,GO:1901363,GO:0003723,GO:0046914","catalytic activity,nucleic acid binding,hydrolase activity,molecular_function,metal ion binding,cation binding,ion binding,binding,manganese ion binding,organic cyclic compound binding,heterocyclic compound binding,RNA binding,transition metal ion binding","sly03018","RNA degradation"]
["TCONS_00129734","XLOC_090571","9:11309985-11312281",0.00095,0.0384387,"Novel_lncRNA","co_expression","Solyc09g055700.3","GO:0016787,GO:0003824,GO:0016788,GO:0003674","hydrolase activity,catalytic activity,hydrolase activity, acting on ester bonds,molecular_function","--","--"]
["TCONS_00163117","XLOC_115062","7:57883451-57891395",0.00055,0.0263241,"Novel_lncRNA","co_location","Solyc07g044870.3","GO:0005575,GO:0005975,GO:0004650,GO:0071555,GO:0004553,GO:0045229,GO:0016798,GO:0071554,GO:0005576,GO:0016043,GO:0044699,GO:0008150,GO:0071840,GO:0016787,GO:0044238,GO:0008152,GO:0003674,GO:0071704,GO:0009987,GO:0044763,GO:0003824","cellular_component,carbohydrate metabolic process,polygalacturonase activity,cell wall organization,hydrolase activity, hydrolyzing O-glycosyl compounds,external encapsulating structure organization,hydrolase activity, acting on glycosyl bonds,cell wall organization or biogenesis,extracellular region,cellular component organization,single-organism process,biological_process,cellular component organization or biogenesis,hydrolase activity,primary metabolic process,metabolic process,molecular_function,organic substance metabolic process,cellular process,single-organism cellular process,catalytic activity","--","--"]
["TCONS_00163117","XLOC_115062","7:57883451-57891395",0.00055,0.0263241,"Novel_lncRNA","co_location","Solyc07g044740.2","GO:0016836,GO:0016829,GO:0016835,GO:0003674,GO:0003824","hydro-lyase activity,lyase activity,carbon-oxygen lyase activity,molecular_function,catalytic activity","sly01200,sly00280,sly00640,sly00410,sly01100","Carbon metabolism,Valine, leucine and isoleucine degradation,Propanoate metabolism,beta-Alanine metabolism,Metabolic pathways"]
["TCONS_00003208","XLOC_002621","2:29207131-29208262",0.00105,0.0410637,"Novel_lncRNA","co_expression","Solyc08g081010.3","GO:0009408,GO:0019438,GO:1901362,GO:0044271,GO:0018130,GO:0006790,GO:0044710,GO:0009266,GO:0044272,GO:0006575,GO:0052482,GO:0052544,GO:0006073,GO:0044042,GO:0000096,GO:0019752,GO:0044281,GO:0043436,GO:0006082,GO:0006520,GO:1901605,GO:0008652,GO:0000097,GO:1901607,GO:0009069,GO:0004357,GO:0006952,GO:0009058,GO:0002376,GO:0006955,GO:0045087,GO:0003824,GO:0044264,GO:0044249,GO:0006749,GO:0005976,GO:0009250,GO:0050896,GO:1901576,GO:0008152,GO:0052386,GO:0052543,GO:0009059,GO:0034645,GO:0009628,GO:0009070,GO:0048367,GO:0052542,GO:0044262,GO:1901566,GO:0048608,GO:0061458,GO:0009908,GO:0016143,GO:0019757,GO:0019760,GO:0022414,GO:0030243,GO:0003674,GO:0042398,GO:0006950,GO:0019748,GO:0006807,GO:0000003,GO:0071704,GO:0009700,GO:0046217,GO:0052314,GO:0052315,GO:0006750,GO:0019184,GO:0006518,GO:0071555,GO:0044283,GO:0010035,GO:0044711,GO:1901360,GO:0042742,GO:0019344,GO:0000271,GO:0051273,GO:0009791,GO:0030244,GO:0044237,GO:0006725,GO:0009532,GO:1901564,GO:0033692,GO:0006534,GO:1901657,GO:0044238,GO:0051707,GO:0008150,GO:0045229,GO:0044550,GO:0016053,GO:0046394,GO:0002213,GO:0016144,GO:0019758,GO:0019761,GO:0046483,GO:1901659,GO:0051704,GO:0043043,GO:0033037,GO:0052545,GO:0051274,GO:0009814,GO:0048731,GO:0009625,GO:0003006,GO:0034641,GO:0009607,GO:0034637,GO:0009816,GO:0042221,GO:0009570,GO:0042435,GO:0046686,GO:0005975,GO:0051716,GO:0050832,GO:0044707,GO:0006096,GO:0009617,GO:0043603,GO:0032501,GO:0071554,GO:0006094,GO:0042430,GO:0006091,GO:0009620,GO:0043231,GO:0043227,GO:0007275,GO:0048856,GO:0019319,GO:0016051,GO:0009987,GO:0044767,GO:0046364,GO:0044446,GO:0044422,GO:0043604,GO:0016881,GO:0010038,GO:0044435,GO:0044260,GO:0044724,GO:0032502,GO:0016052,GO:0016879,GO:0009651,GO:0006007,GO:0019320,GO:0046365,GO:0019318,GO:0044434,GO:0005996,GO:0043170,GO:0006006,GO:0044699,GO:0006970,GO:0009507,GO:1901135,GO:0043229,GO:0043226,GO:1901575,GO:0009536,GO:0009056,GO:0016874,GO:0044723,GO:0042545,GO:0044424,GO:0005575,GO:0005737,GO:0005623,GO:0044464,GO:0033554,GO:0044763,GO:0005622,GO:1901137,GO:0016043,GO:0051179,GO:0044444,GO:0070727,GO:0071840,GO:0033036,GO:0051641","response to heat,aromatic compound biosynthetic process,organic cyclic compound biosynthetic process,cellular nitrogen compound biosynthetic process,heterocycle biosynthetic process,sulfur compound metabolic process,single-organism metabolic process,response to temperature stimulus,sulfur compound biosynthetic process,cellular modified amino acid metabolic process,defense response by cell wall thickening,defense response by callose deposition in cell wall,cellular glucan metabolic process,glucan metabolic process,sulfur amino acid metabolic process,carboxylic acid metabolic process,small molecule metabolic process,oxoacid metabolic process,organic acid metabolic process,cellular amino acid metabolic process,alpha-amino acid metabolic process,cellular amino acid biosynthetic process,sulfur amino acid biosynthetic process,alpha-amino acid biosynthetic process,serine family amino acid metabolic process,glutamate-cysteine ligase activity,defense response,biosynthetic process,immune system process,immune response,innate immune response,catalytic activity,cellular polysaccharide metabolic process,cellular biosynthetic process,glutathione metabolic process,polysaccharide metabolic process,glucan biosynthetic process,response to stimulus,organic substance biosynthetic process,metabolic process,cell wall thickening,callose deposition in cell wall,macromolecule biosynthetic process,cellular macromolecule biosynthetic process,response to abiotic stimulus,serine family amino acid biosynthetic process,shoot system development,defense response by callose deposition,cellular carbohydrate metabolic process,organonitrogen compound biosynthetic process,reproductive structure development,reproductive system development,flower development,S-glycoside metabolic process,glycosinolate metabolic process,glucosinolate metabolic process,reproductive process,cellulose metabolic process,molecular_function,cellular modified amino acid biosynthetic process,response to stress,secondary metabolic process,nitrogen compound metabolic process,reproduction,organic substance metabolic process,indole phytoalexin biosynthetic process,indole phytoalexin metabolic process,phytoalexin metabolic process,phytoalexin biosynthetic process,glutathione biosynthetic process,nonribosomal peptide biosynthetic process,peptide metabolic process,cell wall organization,small molecule biosynthetic process,response to inorganic substance,single-organism biosynthetic process,organic cyclic compound metabolic process,defense response to bacterium,cysteine biosynthetic process,polysaccharide biosynthetic process,beta-glucan metabolic process,post-embryonic development,cellulose biosynthetic process,cellular metabolic process,cellular aromatic compound metabolic process,plastid stroma,organonitrogen compound metabolic process,cellular polysaccharide biosynthetic process,cysteine metabolic process,glycosyl compound metabolic process,primary metabolic process,response to other organism,biological_process,external encapsulating structure organization,secondary metabolite biosynthetic process,organic acid biosynthetic process,carboxylic acid biosynthetic process,defense response to insect,S-glycoside biosynthetic process,glycosinolate biosynthetic process,glucosinolate biosynthetic process,heterocycle metabolic process,glycosyl compound biosynthetic process,multi-organism process,peptide biosynthetic process,polysaccharide localization,callose localization,beta-glucan biosynthetic process,defense response, incompatible interaction,system development,response to insect,developmental process involved in reproduction,cellular nitrogen compound metabolic process,response to biotic stimulus,cellular carbohydrate biosynthetic process,defense response to bacterium, incompatible interaction,response to chemical stimulus,chloroplast stroma,indole-containing compound biosynthetic process,response to cadmium ion,carbohydrate metabolic process,cellular response to stimulus,defense response to fungus,single-multicellular organism process,glycolysis,response to bacterium,cellular amide metabolic process,multicellular organismal process,cell wall organization or biogenesis,gluconeogenesis,indole-containing compound metabolic process,generation of precursor metabolites and energy,response to fungus,intracellular membrane-bounded organelle,membrane-bounded organelle,multicellular organismal development,anatomical structure development,hexose biosynthetic process,carbohydrate biosynthetic process,cellular process,single-organism developmental process,monosaccharide biosynthetic process,intracellular organelle part,organelle part,amide biosynthetic process,acid-amino acid ligase activity,response to metal ion,plastid part,cellular macromolecule metabolic process,single-organism carbohydrate catabolic process,developmental process,carbohydrate catabolic process,ligase activity, forming carbon-nitrogen bonds,response to salt stress,glucose catabolic process,hexose catabolic process,monosaccharide catabolic process,hexose metabolic process,chloroplast part,monosaccharide metabolic process,macromolecule metabolic process,glucose metabolic process,single-organism process,response to osmotic stress,chloroplast,carbohydrate derivative metabolic process,intracellular organelle,organelle,organic substance catabolic process,plastid,catabolic process,ligase activity,single-organism carbohydrate metabolic process,cell wall modification,intracellular part,cellular_component,cytoplasm,cell,cell part,cellular response to stress,single-organism cellular process,intracellular,carbohydrate derivative biosynthetic process,cellular component organization,localization,cytoplasmic part,cellular macromolecule localization,cellular component organization or biogenesis,macromolecule localization,cellular localization","sly01100,sly00480","Metabolic pathways,Glutathione metabolism"]
["TCONS_00150053","XLOC_104931","7:4969119-4970000",{"v":5e-05,"d":"5.00E-05"},0.00428946,"Novel_lncRNA","co_expression","Solyc01g081060.3","GO:0005618,GO:0030312,GO:0048046,GO:0005576,GO:0005623,GO:0044464,GO:0010411,GO:0016762,GO:0005575,GO:0044763,GO:0044036,GO:0003674,GO:0071944,GO:0044699,GO:0004553,GO:0008150,GO:0016798,GO:0071840,GO:0010410,GO:0010383,GO:0008152,GO:0044262,GO:0005975,GO:0044260,GO:0071555,GO:0044085,GO:0071554,GO:0045229,GO:0016043,GO:0006073,GO:0044042,GO:0042546,GO:0003824,GO:0016758,GO:0044237,GO:0043170,GO:0016740,GO:0005976,GO:0044264,GO:0016787,GO:0016757,GO:0009987,GO:0071704,GO:0044238","cell wall,external encapsulating structure,apoplast,extracellular region,cell,cell part,xyloglucan metabolic process,xyloglucan:xyloglucosyl transferase activity,cellular_component,single-organism cellular process,cell wall macromolecule metabolic process,molecular_function,cell periphery,single-organism process,hydrolase activity, hydrolyzing O-glycosyl compounds,biological_process,hydrolase activity, acting on glycosyl bonds,cellular component organization or biogenesis,hemicellulose metabolic process,cell wall polysaccharide metabolic process,metabolic process,cellular carbohydrate metabolic process,carbohydrate metabolic process,cellular macromolecule metabolic process,cell wall organization,cellular component biogenesis,cell wall organization or biogenesis,external encapsulating structure organization,cellular component organization,cellular glucan metabolic process,glucan metabolic process,cell wall biogenesis,catalytic activity,transferase activity, transferring hexosyl groups,cellular metabolic process,macromolecule metabolic process,transferase activity,polysaccharide metabolic process,cellular polysaccharide metabolic process,hydrolase activity,transferase activity, transferring glycosyl groups,cellular process,organic substance metabolic process,primary metabolic process","--","--"]
["TCONS_00030512","XLOC_021399","8:63365396-63367985",{"v":5e-05,"d":"5.00E-05"},0.00428946,"Novel_lncRNA","co_location","Solyc08g080060.3","GO:0030312,GO:0071669,GO:0005618,GO:0071944,GO:0071555,GO:0045229,GO:0009664,GO:0071554,GO:0008150,GO:0005576,GO:0005623,GO:0044464,GO:0009987,GO:0071840,GO:0016043,GO:0044699,GO:0044763,GO:0005575,GO:0016020","external encapsulating structure,plant-type cell wall organization or biogenesis,cell wall,cell periphery,cell wall organization,external encapsulating structure organization,plant-type cell wall organization,cell wall organization or biogenesis,biological_process,extracellular region,cell,cell part,cellular process,cellular component organization or biogenesis,cellular component organization,single-organism process,single-organism cellular process,cellular_component,membrane","--","--"]
["TCONS_00030512","XLOC_021399","8:63365396-63367985",{"v":5e-05,"d":"5.00E-05"},0.00428946,"Novel_lncRNA","co_location","Solyc08g080120.3","GO:0071669,GO:0071555,GO:0045229,GO:0050789,GO:0071554,GO:0043170,GO:0010383,GO:0065007,GO:0005976,GO:0044262,GO:0008150,GO:0050794,GO:0019222,GO:0010410,GO:0044264,GO:0044036,GO:0019219,GO:0071704,GO:0044238,GO:0051171,GO:0006355,GO:2001141,GO:0009834,GO:0051252,GO:0010556,GO:2000112,GO:0008152,GO:0005634,GO:0010026,GO:0031326,GO:0042546,GO:0008154,GO:2000652,GO:0009889,GO:0010468,GO:0051258,GO:0060255,GO:0080090,GO:0031323,GO:0006139,GO:0007015,GO:0009913,GO:0030855,GO:0060429,GO:0043623,GO:0009832,GO:0034622,GO:0030154,GO:0071822,GO:0030036,GO:0043933,GO:0051128,GO:0090304,GO:0006351,GO:0032774,GO:0030838,GO:0031334,GO:0032273,GO:0045010,GO:0033043,GO:0005975,GO:0008064,GO:0030041,GO:0030832,GO:0030833,GO:0032271,GO:0043254,GO:0046483,GO:0032502,GO:0032956,GO:0032970,GO:0030029,GO:0051495,GO:0044085,GO:0010090,GO:0016070,GO:0065003,GO:0010413,GO:0006461,GO:0000904,GO:0070271,GO:0044723,GO:0007275,GO:0018130,GO:0032501,GO:1901360,GO:0044260,GO:0005623,GO:0044464,GO:0044707,GO:0006725,GO:0044087,GO:0034654,GO:0034641,GO:0003676,GO:0010467,GO:0010015,GO:1901362,GO:0045492,GO:0009987,GO:0045491,GO:0010638,GO:0070592,GO:0051493,GO:0003677,GO:0044271,GO:0010089,GO:0044038,GO:0070589,GO:0043231,GO:0032535,GO:0090066,GO:0043227,GO:0006807,GO:0044237,GO:0009059,GO:0048856,GO:0044767,GO:0051130,GO:0071840,GO:0022607,GO:0048869,GO:0009058,GO:0019438,GO:0016043,GO:0007155,GO:0022610,GO:0034645,GO:0097159,GO:1901363,GO:0044699,GO:0010087,GO:0008544,GO:0043588,GO:0003674,GO:0048731,GO:0043229,GO:0043226,GO:0044763,GO:0007010,GO:0048468,GO:0022622,GO:0048364,GO:0044249,GO:0065008,GO:0000902,GO:1901576,GO:0005488,GO:0000271,GO:0048513,GO:0044424,GO:0032989,GO:0016051,GO:0045892,GO:0051253,GO:0048764,GO:0048765,GO:0033692,GO:0048469,GO:0005622,GO:0009653,GO:0010054,GO:0010558,GO:2000113,GO:0010053,GO:0045934,GO:0009888,GO:0051172,GO:0031327,GO:0009890,GO:0010629,GO:0021700,GO:0034637,GO:0048522,GO:0005575,GO:0031324,GO:0010605,GO:0009892,GO:0048523,GO:0048518,GO:0006996,GO:0048519","plant-type cell wall organization or biogenesis,cell wall organization,external encapsulating structure organization,regulation of biological process,cell wall organization or biogenesis,macromolecule metabolic process,cell wall polysaccharide metabolic process,biological regulation,polysaccharide metabolic process,cellular carbohydrate metabolic process,biological_process,regulation of cellular process,regulation of metabolic process,hemicellulose metabolic process,cellular polysaccharide metabolic process,cell wall macromolecule metabolic process,regulation of nucleobase-containing compound metabolic process,organic substance metabolic process,primary metabolic process,regulation of nitrogen compound metabolic process,regulation of transcription, DNA-dependent,regulation of RNA biosynthetic process,secondary cell wall biogenesis,regulation of RNA metabolic process,regulation of macromolecule biosynthetic process,regulation of cellular macromolecule biosynthetic process,metabolic process,nucleus,trichome differentiation,regulation of cellular biosynthetic process,cell wall biogenesis,actin polymerization or depolymerization,regulation of secondary cell wall biogenesis,regulation of biosynthetic process,regulation of gene expression,protein polymerization,regulation of macromolecule metabolic process,regulation of primary metabolic process,regulation of cellular metabolic process,nucleobase-containing compound metabolic process,actin filament organization,epidermal cell differentiation,epithelial cell differentiation,epithelium development,cellular protein complex assembly,plant-type cell wall biogenesis,cellular macromolecular complex assembly,cell differentiation,protein complex subunit organization,actin cytoskeleton organization,macromolecular complex subunit organization,regulation of cellular component organization,nucleic acid metabolic process,transcription, DNA-dependent,RNA biosynthetic process,positive regulation of actin filament polymerization,positive regulation of protein complex assembly,positive regulation of protein polymerization,actin nucleation,regulation of organelle organization,carbohydrate metabolic process,regulation of actin polymerization or depolymerization,actin filament polymerization,regulation of actin filament length,regulation of actin filament polymerization,regulation of protein polymerization,regulation of protein complex assembly,heterocycle metabolic process,developmental process,regulation of actin cytoskeleton organization,regulation of actin filament-based process,actin filament-based process,positive regulation of cytoskeleton organization,cellular component biogenesis,trichome morphogenesis,RNA metabolic process,macromolecular complex assembly,glucuronoxylan metabolic process,protein complex assembly,cell morphogenesis involved in differentiation,protein complex biogenesis,single-organism carbohydrate metabolic process,multicellular organismal development,heterocycle biosynthetic process,multicellular organismal process,organic cyclic compound metabolic process,cellular macromolecule metabolic process,cell,cell part,single-multicellular organism process,cellular aromatic compound metabolic process,regulation of cellular component biogenesis,nucleobase-containing compound biosynthetic process,cellular nitrogen compound metabolic process,nucleic acid binding,gene expression,root morphogenesis,organic cyclic compound biosynthetic process,xylan biosynthetic process,cellular process,xylan metabolic process,positive regulation of organelle organization,cell wall polysaccharide biosynthetic process,regulation of cytoskeleton organization,DNA binding,cellular nitrogen compound biosynthetic process,xylem development,cell wall macromolecule biosynthetic process,cellular component macromolecule biosynthetic process,intracellular membrane-bounded organelle,regulation of cellular component size,regulation of anatomical structure size,membrane-bounded organelle,nitrogen compound metabolic process,cellular metabolic process,macromolecule biosynthetic process,anatomical structure development,single-organism developmental process,positive regulation of cellular component organization,cellular component organization or biogenesis,cellular component assembly,cellular developmental process,biosynthetic process,aromatic compound biosynthetic process,cellular component organization,cell adhesion,biological adhesion,cellular macromolecule biosynthetic process,organic cyclic compound binding,heterocyclic compound binding,single-organism process,phloem or xylem histogenesis,epidermis development,skin development,molecular_function,system development,intracellular organelle,organelle,single-organism cellular process,cytoskeleton organization,cell development,root system development,root development,cellular biosynthetic process,regulation of biological quality,cell morphogenesis,organic substance biosynthetic process,binding,polysaccharide biosynthetic process,organ development,intracellular part,cellular component morphogenesis,carbohydrate biosynthetic process,negative regulation of transcription, DNA-dependent,negative regulation of RNA metabolic process,trichoblast maturation,root hair cell differentiation,cellular polysaccharide biosynthetic process,cell maturation,intracellular,anatomical structure morphogenesis,trichoblast differentiation,negative regulation of macromolecule biosynthetic process,negative regulation of cellular macromolecule biosynthetic process,root epidermal cell differentiation,negative regulation of nucleobase-containing compound metabolic process,tissue development,negative regulation of nitrogen compound metabolic process,negative regulation of cellular biosynthetic process,negative regulation of biosynthetic process,negative regulation of gene expression,developmental maturation,cellular carbohydrate biosynthetic process,positive regulation of cellular process,cellular_component,negative regulation of cellular metabolic process,negative regulation of macromolecule metabolic process,negative regulation of metabolic process,negative regulation of cellular process,positive regulation of biological process,organelle organization,negative regulation of biological process","--","--"]
["TCONS_00051510","XLOC_036966","11:681237-683973",0.00015,0.010236,"Novel_lncRNA","co_location","Solyc11g005750.2","GO:0030312,GO:0005618,GO:0071944,GO:0071555,GO:0045229,GO:0071554,GO:0043170,GO:0010393,GO:0045488,GO:0005976,GO:0008150,GO:0071704,GO:0003824,GO:0044238,GO:0016052,GO:0008152,GO:0052689,GO:0045490,GO:0000272,GO:0016787,GO:0004857,GO:0005975,GO:0030599,GO:0042545,GO:0005623,GO:0044464,GO:0009057,GO:0009987,GO:0045330,GO:0071840,GO:0030234,GO:0016043,GO:0044699,GO:0003674,GO:1901575,GO:0044763,GO:0009056,GO:0016788,GO:0005575","external encapsulating structure,cell wall,cell periphery,cell wall organization,external encapsulating structure organization,cell wall organization or biogenesis,macromolecule metabolic process,galacturonan metabolic process,pectin metabolic process,polysaccharide metabolic process,biological_process,organic substance metabolic process,catalytic activity,primary metabolic process,carbohydrate catabolic process,metabolic process,carboxylic ester hydrolase activity,pectin catabolic process,polysaccharide catabolic process,hydrolase activity,enzyme inhibitor activity,carbohydrate metabolic process,pectinesterase activity,cell wall modification,cell,cell part,macromolecule catabolic process,cellular process,aspartyl esterase activity,cellular component organization or biogenesis,enzyme regulator activity,cellular component organization,single-organism process,molecular_function,organic substance catabolic process,single-organism cellular process,catabolic process,hydrolase activity, acting on ester bonds,cellular_component","--","--"]
["TCONS_00051510","XLOC_036966","11:681237-683973",0.00015,0.010236,"Novel_lncRNA","co_location","Solyc11g005760.2","GO:0071669,GO:0071554,GO:0043170,GO:0010383,GO:0080116,GO:0005976,GO:0044262,GO:0008150,GO:0010410,GO:0044264,GO:0044036,GO:0071704,GO:0003824,GO:0010417,GO:0044238,GO:0009834,GO:0008152,GO:0042546,GO:0009832,GO:0005975,GO:0044085,GO:0010413,GO:0015020,GO:0044723,GO:0044260,GO:0005623,GO:0044464,GO:0008194,GO:0045492,GO:0009987,GO:0045491,GO:0070592,GO:0044038,GO:0070589,GO:0043231,GO:0043227,GO:0044237,GO:0009059,GO:0071840,GO:0009058,GO:0016740,GO:0034645,GO:0044699,GO:0003674,GO:0043229,GO:0043226,GO:0044763,GO:0044249,GO:1901576,GO:0000271,GO:0044424,GO:0016758,GO:0016051,GO:0033692,GO:0016757,GO:0005622,GO:0034637,GO:0005575,GO:0005794,GO:0005737,GO:0044444","plant-type cell wall organization or biogenesis,cell wall organization or biogenesis,macromolecule metabolic process,cell wall polysaccharide metabolic process,glucuronoxylan glucuronosyltransferase activity,polysaccharide metabolic process,cellular carbohydrate metabolic process,biological_process,hemicellulose metabolic process,cellular polysaccharide metabolic process,cell wall macromolecule metabolic process,organic substance metabolic process,catalytic activity,glucuronoxylan biosynthetic process,primary metabolic process,secondary cell wall biogenesis,metabolic process,cell wall biogenesis,plant-type cell wall biogenesis,carbohydrate metabolic process,cellular component biogenesis,glucuronoxylan metabolic process,glucuronosyltransferase activity,single-organism carbohydrate metabolic process,cellular macromolecule metabolic process,cell,cell part,UDP-glycosyltransferase activity,xylan biosynthetic process,cellular process,xylan metabolic process,cell wall polysaccharide biosynthetic process,cell wall macromolecule biosynthetic process,cellular component macromolecule biosynthetic process,intracellular membrane-bounded organelle,membrane-bounded organelle,cellular metabolic process,macromolecule biosynthetic process,cellular component organization or biogenesis,biosynthetic process,transferase activity,cellular macromolecule biosynthetic process,single-organism process,molecular_function,intracellular organelle,organelle,single-organism cellular process,cellular biosynthetic process,organic substance biosynthetic process,polysaccharide biosynthetic process,intracellular part,transferase activity, transferring hexosyl groups,carbohydrate biosynthetic process,cellular polysaccharide biosynthetic process,transferase activity, transferring glycosyl groups,intracellular,cellular carbohydrate biosynthetic process,cellular_component,Golgi apparatus,cytoplasm,cytoplasmic part","--","--"]
["TCONS_00025811","XLOC_017285","12:4737819-4741578",{"v":5e-05,"d":"5.00E-05"},0.00428946,"Novel_lncRNA","co_expression","Solyc03g114860.3","GO:0008150,GO:0003824,GO:0005976,GO:0006073,GO:0044042,GO:0044264,GO:0044262,GO:0008152,GO:0030243,GO:0044710,GO:0051273,GO:0003674,GO:0005975,GO:0033356,GO:0044281,GO:0071704,GO:0009987,GO:0030244,GO:0009225,GO:0051274,GO:0055086,GO:0016020,GO:0044237,GO:0044238,GO:0009058,GO:0009059,GO:0044723,GO:0016866,GO:0034645,GO:0000271,GO:0016853,GO:1901135,GO:0009117,GO:0006725,GO:0043170,GO:0006753,GO:0006807,GO:1901360,GO:0044249,GO:1901576,GO:0033692,GO:0005911,GO:0009506,GO:0030054,GO:0055044,GO:0016051,GO:0034637,GO:0009250,GO:0006139,GO:0005575,GO:0034641,GO:0044260,GO:0019637,GO:0046483,GO:0006796,GO:0006793","biological_process,catalytic activity,polysaccharide metabolic process,cellular glucan metabolic process,glucan metabolic process,cellular polysaccharide metabolic process,cellular carbohydrate metabolic process,metabolic process,cellulose metabolic process,single-organism metabolic process,beta-glucan metabolic process,molecular_function,carbohydrate metabolic process,UDP-L-arabinose metabolic process,small molecule metabolic process,organic substance metabolic process,cellular process,cellulose biosynthetic process,nucleotide-sugar metabolic process,beta-glucan biosynthetic process,nucleobase-containing small molecule metabolic process,membrane,cellular metabolic process,primary metabolic process,biosynthetic process,macromolecule biosynthetic process,single-organism carbohydrate metabolic process,intramolecular transferase activity,cellular macromolecule biosynthetic process,polysaccharide biosynthetic process,isomerase activity,carbohydrate derivative metabolic process,nucleotide metabolic process,cellular aromatic compound metabolic process,macromolecule metabolic process,nucleoside phosphate metabolic process,nitrogen compound metabolic process,organic cyclic compound metabolic process,cellular biosynthetic process,organic substance biosynthetic process,cellular polysaccharide biosynthetic process,cell-cell junction,plasmodesma,cell junction,symplast,carbohydrate biosynthetic process,cellular carbohydrate biosynthetic process,glucan biosynthetic process,nucleobase-containing compound metabolic process,cellular_component,cellular nitrogen compound metabolic process,cellular macromolecule metabolic process,organophosphate metabolic process,heterocycle metabolic process,phosphate-containing compound metabolic process,phosphorus metabolic process","--","--"]
["TCONS_00043558","XLOC_031031","11:17054041-17057176",{"v":5e-05,"d":"5.00E-05"},0.00428946,"Novel_lncRNA","co_location","Solyc11g050990.2","GO:0045229,GO:0071555,GO:0052689,GO:0071554,GO:0042545,GO:0071944,GO:0071840,GO:0030312,GO:0016043,GO:0030599,GO:0005618,GO:0044699,GO:0044763,GO:0016788,GO:0005575,GO:0016787,GO:0009987,GO:0003824,GO:0008150,GO:0003674,GO:0005623,GO:0044464","external encapsulating structure organization,cell wall organization,carboxylic ester hydrolase activity,cell wall organization or biogenesis,cell wall modification,cell periphery,cellular component organization or biogenesis,external encapsulating structure,cellular component organization,pectinesterase activity,cell wall,single-organism process,single-organism cellular process,hydrolase activity, acting on ester bonds,cellular_component,hydrolase activity,cellular process,catalytic activity,biological_process,molecular_function,cell,cell part","sly01100,sly00500,sly00040","Metabolic pathways,Starch and sucrose metabolism,Pentose and glucuronate interconversions"]
["TCONS_00112475","XLOC_078097","4:64580144-64584362",0.0004,0.02096,"Novel_lncRNA","co_location","Solyc04g080530.3","GO:0005623,GO:0044464,GO:0005575,GO:0003824,GO:0045330,GO:0005618,GO:0030312,GO:0008150,GO:0044699,GO:0071944,GO:0030599,GO:0042545,GO:0071840,GO:0003674,GO:0016043,GO:0052689,GO:0071554,GO:0044763,GO:0016787,GO:0071555,GO:0045229,GO:0016788,GO:0009987","cell,cell part,cellular_component,catalytic activity,aspartyl esterase activity,cell wall,external encapsulating structure,biological_process,single-organism process,cell periphery,pectinesterase activity,cell wall modification,cellular component organization or biogenesis,molecular_function,cellular component organization,carboxylic ester hydrolase activity,cell wall organization or biogenesis,single-organism cellular process,hydrolase activity,cell wall organization,external encapsulating structure organization,hydrolase activity, acting on ester bonds,cellular process","sly00040,sly00500,sly01100","Pentose and glucuronate interconversions,Starch and sucrose metabolism,Metabolic pathways"]
["TCONS_00166416","XLOC_116937","4:59583107-59584293",0.00135,0.0487258,"Novel_lncRNA","co_expression","Solyc09g075330.3","GO:0030312,GO:0005618,GO:0005976,GO:0045229,GO:0071555,GO:0003824,GO:0071944,GO:0071554,GO:0005975,GO:0008152,GO:0008150,GO:0016787,GO:0045490,GO:0010393,GO:0045488,GO:0003674,GO:0000272,GO:0045330,GO:0004857,GO:0042545,GO:0016043,GO:0071704,GO:0071840,GO:0044238,GO:0016052,GO:0030234,GO:1901575,GO:0030599,GO:0009056,GO:0009057,GO:0044699,GO:0016788,GO:0052689,GO:0009987,GO:0044763,GO:0043170,GO:0005575,GO:0005623,GO:0044464","external encapsulating structure,cell wall,polysaccharide metabolic process,external encapsulating structure organization,cell wall organization,catalytic activity,cell periphery,cell wall organization or biogenesis,carbohydrate metabolic process,metabolic process,biological_process,hydrolase activity,pectin catabolic process,galacturonan metabolic process,pectin metabolic process,molecular_function,polysaccharide catabolic process,aspartyl esterase activity,enzyme inhibitor activity,cell wall modification,cellular component organization,organic substance metabolic process,cellular component organization or biogenesis,primary metabolic process,carbohydrate catabolic process,enzyme regulator activity,organic substance catabolic process,pectinesterase activity,catabolic process,macromolecule catabolic process,single-organism process,hydrolase activity, acting on ester bonds,carboxylic ester hydrolase activity,cellular process,single-organism cellular process,macromolecule metabolic process,cellular_component,cell,cell part","sly00040,sly01100,sly00500","Pentose and glucuronate interconversions,Metabolic pathways,Starch and sucrose metabolism"]
["TCONS_00099819","XLOC_069665","2:39146180-39148982",{"v":5e-05,"d":"5.00E-05"},0.00428946,"Novel_lncRNA","co_location","Solyc02g069300.2","GO:0052689,GO:0030599,GO:0016788,GO:0016787,GO:0030234,GO:0003824,GO:0003674,GO:0004857","carboxylic ester hydrolase activity,pectinesterase activity,hydrolase activity, acting on ester bonds,hydrolase activity,enzyme regulator activity,catalytic activity,molecular_function,enzyme inhibitor activity","--","--"]
["TCONS_00099819","XLOC_069665","2:39146180-39148982",{"v":5e-05,"d":"5.00E-05"},0.00428946,"Novel_lncRNA","co_expression","Solyc02g093580.3","GO:0005975,GO:0003824,GO:0016829,GO:0016835,GO:0046872,GO:0043169,GO:0043167,GO:0008150,GO:0003674,GO:0008152,GO:0005976,GO:0000272,GO:0045490,GO:0016837,GO:0030570,GO:0044238,GO:0010393,GO:0045488,GO:0016052,GO:0009056,GO:0009057,GO:0071704,GO:0005488,GO:1901575,GO:0043170","carbohydrate metabolic process,catalytic activity,lyase activity,carbon-oxygen lyase activity,metal ion binding,cation binding,ion binding,biological_process,molecular_function,metabolic process,polysaccharide metabolic process,polysaccharide catabolic process,pectin catabolic process,carbon-oxygen lyase activity, acting on polysaccharides,pectate lyase activity,primary metabolic process,galacturonan metabolic process,pectin metabolic process,carbohydrate catabolic process,catabolic process,macromolecule catabolic process,organic substance metabolic process,binding,organic substance catabolic process,macromolecule metabolic process","sly00040","Pentose and glucuronate interconversions"]
["TCONS_00189697","XLOC_134491","9:72240619-72243509",{"v":5e-05,"d":"5.00E-05"},0.00428946,"Novel_lncRNA","co_location","Solyc09g098270.3","GO:0004650,GO:0071554,GO:0071555,GO:0004553,GO:0045229,GO:0016798,GO:0005576,GO:0005575,GO:0008152,GO:0016787,GO:0008150,GO:0071840,GO:0016043,GO:0044238,GO:0003824,GO:0071704,GO:0003674,GO:0044699,GO:0005975,GO:0044763,GO:0009987","polygalacturonase activity,cell wall organization or biogenesis,cell wall organization,hydrolase activity, hydrolyzing O-glycosyl compounds,external encapsulating structure organization,hydrolase activity, acting on glycosyl bonds,extracellular region,cellular_component,metabolic process,hydrolase activity,biological_process,cellular component organization or biogenesis,cellular component organization,primary metabolic process,catalytic activity,organic substance metabolic process,molecular_function,single-organism process,carbohydrate metabolic process,single-organism cellular process,cellular process","--","--"]
["TCONS_00189697","XLOC_134491","10:5479873-5485103",0.00035,0.0190872,"Novel_lncRNA","co_location","Solyc10g017600.3","GO:0071555,GO:0045229,GO:0071554,GO:0043170,GO:0010393,GO:0045488,GO:0005976,GO:0008150,GO:0071704,GO:0003824,GO:0044238,GO:0008152,GO:0031090,GO:0005975,GO:0044723,GO:0005623,GO:0044464,GO:0045489,GO:0008194,GO:0047262,GO:0009987,GO:0044431,GO:0012505,GO:0043231,GO:0043227,GO:0009059,GO:0071840,GO:0009058,GO:0016043,GO:0016740,GO:0044699,GO:0003674,GO:0043229,GO:0043226,GO:0044763,GO:1901576,GO:0000139,GO:0000271,GO:0044424,GO:0016758,GO:0016051,GO:0016757,GO:0005622,GO:0044446,GO:0044422,GO:0005575,GO:0005794,GO:0016020,GO:0005737,GO:0044444","cell wall organization,external encapsulating structure organization,cell wall organization or biogenesis,macromolecule metabolic process,galacturonan metabolic process,pectin metabolic process,polysaccharide metabolic process,biological_process,organic substance metabolic process,catalytic activity,primary metabolic process,metabolic process,organelle membrane,carbohydrate metabolic process,single-organism carbohydrate metabolic process,cell,cell part,pectin biosynthetic process,UDP-glycosyltransferase activity,polygalacturonate 4-alpha-galacturonosyltransferase activity,cellular process,Golgi apparatus part,endomembrane system,intracellular membrane-bounded organelle,membrane-bounded organelle,macromolecule biosynthetic process,cellular component organization or biogenesis,biosynthetic process,cellular component organization,transferase activity,single-organism process,molecular_function,intracellular organelle,organelle,single-organism cellular process,organic substance biosynthetic process,Golgi membrane,polysaccharide biosynthetic process,intracellular part,transferase activity, transferring hexosyl groups,carbohydrate biosynthetic process,transferase activity, transferring glycosyl groups,intracellular,intracellular organelle part,organelle part,cellular_component,Golgi apparatus,membrane,cytoplasm,cytoplasmic part","sly01110,sly00520,sly00500","Biosynthesis of secondary metabolites,Amino sugar and nucleotide sugar metabolism,Starch and sucrose metabolism"]
["TCONS_001060","XLOC_019879","3:65870186-65874334",0.00045,0.0228108,"Novel_lncRNA","co_location","Solyc03g116580.3","GO:0005576,GO:0045229,GO:0071555,GO:0004650,GO:0004553,GO:0071554,GO:0016798,GO:0071840,GO:0016043,GO:0005975,GO:0044699,GO:0044763,GO:0005575,GO:0016787,GO:0008152,GO:0009987,GO:0003824,GO:0008150,GO:0003674,GO:0044238,GO:0071704","extracellular region,external encapsulating structure organization,cell wall organization,polygalacturonase activity,hydrolase activity, hydrolyzing O-glycosyl compounds,cell wall organization or biogenesis,hydrolase activity, acting on glycosyl bonds,cellular component organization or biogenesis,cellular component organization,carbohydrate metabolic process,single-organism process,single-organism cellular process,cellular_component,hydrolase activity,metabolic process,cellular process,catalytic activity,biological_process,molecular_function,primary metabolic process,organic substance metabolic process","--","--"]
["TCONS_001060","XLOC_019879","3:65870186-65874334",0.00045,0.0228108,"Novel_lncRNA","co_location","Solyc03g116500.3","GO:0005576,GO:0045229,GO:0071555,GO:0004650,GO:0004553,GO:0071554,GO:0016798,GO:0071840,GO:0016043,GO:0005975,GO:0044699,GO:0044763,GO:0005575,GO:0016787,GO:0008152,GO:0009987,GO:0003824,GO:0008150,GO:0003674,GO:0044238,GO:0071704","extracellular region,external encapsulating structure organization,cell wall organization,polygalacturonase activity,hydrolase activity, hydrolyzing O-glycosyl compounds,cell wall organization or biogenesis,hydrolase activity, acting on glycosyl bonds,cellular component organization or biogenesis,cellular component organization,carbohydrate metabolic process,single-organism process,single-organism cellular process,cellular_component,hydrolase activity,metabolic process,cellular process,catalytic activity,biological_process,molecular_function,primary metabolic process,organic substance metabolic process","--","--"]
["TCONS_00166416","XLOC_116937","4:59583107-59584293",0.00135,0.0487258,"Novel_lncRNA","co_expression","Solyc07g055990.3","GO:0030312,GO:0016762,GO:0048046,GO:0005576,GO:0010411,GO:0005618,GO:0005976,GO:0045229,GO:0071555,GO:0003824,GO:0010410,GO:0010383,GO:0006073,GO:0044042,GO:0044036,GO:0004553,GO:0071944,GO:0071554,GO:0016798,GO:0005975,GO:0044262,GO:0044264,GO:0042546,GO:0008152,GO:0016758,GO:0008150,GO:0016757,GO:0016787,GO:0003674,GO:0016043,GO:0071704,GO:0044085,GO:0071840,GO:0044238,GO:0044237,GO:0044699,GO:0016740,GO:0009987,GO:0044763,GO:0043170,GO:0005575,GO:0005623,GO:0044464,GO:0044260","external encapsulating structure,xyloglucan:xyloglucosyl transferase activity,apoplast,extracellular region,xyloglucan metabolic process,cell wall,polysaccharide metabolic process,external encapsulating structure organization,cell wall organization,catalytic activity,hemicellulose metabolic process,cell wall polysaccharide metabolic process,cellular glucan metabolic process,glucan metabolic process,cell wall macromolecule metabolic process,hydrolase activity, hydrolyzing O-glycosyl compounds,cell periphery,cell wall organization or biogenesis,hydrolase activity, acting on glycosyl bonds,carbohydrate metabolic process,cellular carbohydrate metabolic process,cellular polysaccharide metabolic process,cell wall biogenesis,metabolic process,transferase activity, transferring hexosyl groups,biological_process,transferase activity, transferring glycosyl groups,hydrolase activity,molecular_function,cellular component organization,organic substance metabolic process,cellular component biogenesis,cellular component organization or biogenesis,primary metabolic process,cellular metabolic process,single-organism process,transferase activity,cellular process,single-organism cellular process,macromolecule metabolic process,cellular_component,cell,cell part,cellular macromolecule metabolic process","--","--"]
["TCONS_00166416","XLOC_116937","4:59583107-59584293",0.00035,0.00135,"Novel_lncRNA","co_expression","Solyc07g055990.3","GO:0030312,GO:0016762,GO:0048046,GO:0005576,GO:0010411,GO:0005618,GO:0005976,GO:0045229,GO:0071555,GO:0003824,GO:0010410,GO:0010383,GO:0006073,GO:0044042,GO:0044036,GO:0004553,GO:0071944,GO:0071554,GO:0016798,GO:0005975,GO:0044262,GO:0044264,GO:0042546,GO:0008152,GO:0016758,GO:0008150,GO:0016757,GO:0016787,GO:0003674,GO:0016043,GO:0071704,GO:0044085,GO:0071840,GO:0044238,GO:0044237,GO:0044699,GO:0016740,GO:0009987,GO:0044763,GO:0043170,GO:0005575,GO:0005623,GO:0044464,GO:0044260","external encapsulating structure,xyloglucan:xyloglucosyl transferase activity,apoplast,extracellular region,xyloglucan metabolic process,cell wall,polysaccharide metabolic process,external encapsulating structure organization,cell wall organization,catalytic activity,hemicellulose metabolic process,cell wall polysaccharide metabolic process,cellular glucan metabolic process,glucan metabolic process,cell wall macromolecule metabolic process,hydrolase activity, hydrolyzing O-glycosyl compounds,cell periphery,cell wall organization or biogenesis,hydrolase activity, acting on glycosyl bonds,carbohydrate metabolic process,cellular carbohydrate metabolic process,cellular polysaccharide metabolic process,cell wall biogenesis,metabolic process,transferase activity, transferring hexosyl groups,biological_process,transferase activity, transferring glycosyl groups,hydrolase activity,molecular_function,cellular component organization,organic substance metabolic process,cellular component biogenesis,cellular component organization or biogenesis,primary metabolic process,cellular metabolic process,single-organism process,transferase activity,cellular process,single-organism cellular process,macromolecule metabolic process,cellular_component,cell,cell part,cellular macromolecule metabolic process","--","--"]
["TCONS_00002500","XLOC_001983","12:3954862-3955356",0.00045,{"v":5e-05,"d":"5.00E-05"},"Novel_lncRNA","co_location","Solyc12g011030.2","GO:0005576,GO:0003824,GO:0008152,GO:0048046,GO:0045229,GO:0008150,GO:0071555,GO:0005976,GO:0071704,GO:0016762,GO:0006073,GO:0044042,GO:0044262,GO:0044264,GO:0044238,GO:0003674,GO:0044237,GO:0005618,GO:0030312,GO:0071554,GO:0016758,GO:0016757,GO:0016740,GO:0071944,GO:0016787,GO:0004553,GO:0044260,GO:0009987,GO:0005975,GO:0016798,GO:0044699,GO:0043170,GO:0005575,GO:0005623,GO:0044464,GO:0016043,GO:0044763,GO:0071840","extracellular region,catalytic activity,metabolic process,apoplast,external encapsulating structure organization,biological_process,cell wall organization,polysaccharide metabolic process,organic substance metabolic process,xyloglucan:xyloglucosyl transferase activity,cellular glucan metabolic process,glucan metabolic process,cellular carbohydrate metabolic process,cellular polysaccharide metabolic process,primary metabolic process,molecular_function,cellular metabolic process,cell wall,external encapsulating structure,cell wall organization or biogenesis,transferase activity, transferring hexosyl groups,transferase activity, transferring glycosyl groups,transferase activity,cell periphery,hydrolase activity,hydrolase activity, hydrolyzing O-glycosyl compounds,cellular macromolecule metabolic process,cellular process,carbohydrate metabolic process,hydrolase activity, acting on glycosyl bonds,single-organism process,macromolecule metabolic process,cellular_component,cell,cell part,cellular component organization,single-organism cellular process,cellular component organization or biogenesis","--","--"]
["TCONS_00166416","XLOC_116937","4:59583107-59584293",0.00045,0.00135,"Novel_lncRNA","co_expression","Solyc09g075330.3","GO:0030312,GO:0005618,GO:0005976,GO:0045229,GO:0071555,GO:0003824,GO:0071944,GO:0071554,GO:0005975,GO:0008152,GO:0008150,GO:0016787,GO:0045490,GO:0010393,GO:0045488,GO:0003674,GO:0000272,GO:0045330,GO:0004857,GO:0042545,GO:0016043,GO:0071704,GO:0071840,GO:0044238,GO:0016052,GO:0030234,GO:1901575,GO:0030599,GO:0009056,GO:0009057,GO:0044699,GO:0016788,GO:0052689,GO:0009987,GO:0044763,GO:0043170,GO:0005575,GO:0005623,GO:0044464","external encapsulating structure,cell wall,polysaccharide metabolic process,external encapsulating structure organization,cell wall organization,catalytic activity,cell periphery,cell wall organization or biogenesis,carbohydrate metabolic process,metabolic process,biological_process,hydrolase activity,pectin catabolic process,galacturonan metabolic process,pectin metabolic process,molecular_function,polysaccharide catabolic process,aspartyl esterase activity,enzyme inhibitor activity,cell wall modification,cellular component organization,organic substance metabolic process,cellular component organization or biogenesis,primary metabolic process,carbohydrate catabolic process,enzyme regulator activity,organic substance catabolic process,pectinesterase activity,catabolic process,macromolecule catabolic process,single-organism process,hydrolase activity, acting on ester bonds,carboxylic ester hydrolase activity,cellular process,single-organism cellular process,macromolecule metabolic process,cellular_component,cell,cell part","sly00040,sly01100,sly00500","Pentose and glucuronate interconversions,Metabolic pathways,Starch and sucrose metabolism"]
["TCONS_00173556","XLOC_122301","6:21000303-21004653",0.00135,0.0001,"Novel_lncRNA","co_expression","Solyc08g077910.3","GO:0005576,GO:0005575","extracellular region,cellular_component","--","--"]
[]
["others"]
["transcript_id","gene_id","gene_location","pvalue","qvalue","Status","Target_prediction_method","Target_gene_id","Target_GO_id","Target_GO_description","Target_KO_id","Target_KO_description"]
["TCONS_00195403","XLOC_139199","9:66268717-66270455",{"v":5e-05,"d":"5.00E-05"},0.00428946,"Novel_lncRNA","co_location","Solyc09g074400.2","GO:0097361,GO:0016226,GO:0031163,GO:0005737,GO:0005575,GO:0044444,GO:0005623,GO:0044464,GO:0044424,GO:0022607,GO:0005622,GO:0043234,GO:0044445,GO:0009058,GO:0005829,GO:0044085,GO:0032991,GO:0005488,GO:0005515,GO:0016043,GO:0008150,GO:0071840,GO:0008152,GO:0003674","CIA complex,iron-sulfur cluster assembly,metallo-sulfur cluster assembly,cytoplasm,cellular_component,cytoplasmic part,cell,cell part,intracellular part,cellular component assembly,intracellular,protein complex,cytosolic part,biosynthetic process,cytosol,cellular component biogenesis,macromolecular complex,binding,protein binding,cellular component organization,biological_process,cellular component organization or biogenesis,metabolic process,molecular_function","--","--"]
["TCONS_00195403","XLOC_139199","9:66268717-66270455",{"v":5e-05,"d":"5.00E-05"},0.00428946,"Novel_lncRNA","co_expression","Solyc04g077370.1","GO:0005524,GO:0032559,GO:0030554,GO:0035639,GO:0001883,GO:0032550,GO:0032555,GO:0017076,GO:0032549,GO:0001882,GO:0032553,GO:0043168,GO:0036094,GO:0008037,GO:0048544,GO:0000003,GO:0009875,GO:0000166,GO:1901265,GO:0044707,GO:0048610,GO:0032501,GO:0043167,GO:0005488,GO:0022414,GO:0009856,GO:0044703,GO:0044706,GO:0043170,GO:0044260,GO:0097159,GO:1901363,GO:0044267,GO:0008152,GO:0019538,GO:0006468,GO:0051704,GO:0008150,GO:0016310,GO:0044237,GO:0044238,GO:0004672,GO:0003824,GO:0071704,GO:0043412,GO:0016773,GO:0003674,GO:0006464,GO:0036211,GO:0016772,GO:0016301,GO:0044699,GO:0044763,GO:0006796,GO:0006793,GO:0016740,GO:0009987,GO:0004674,GO:0007154","ATP binding,adenyl ribonucleotide binding,adenyl nucleotide binding,purine ribonucleoside triphosphate binding,purine nucleoside binding,purine ribonucleoside binding,purine ribonucleotide binding,purine nucleotide binding,ribonucleoside binding,nucleoside binding,ribonucleotide binding,anion binding,small molecule binding,cell recognition,recognition of pollen,reproduction,pollen-pistil interaction,nucleotide binding,nucleoside phosphate binding,single-multicellular organism process,cellular process involved in reproduction,multicellular organismal process,ion binding,binding,reproductive process,pollination,multi-organism reproductive process,multi-multicellular organism process,macromolecule metabolic process,cellular macromolecule metabolic process,organic cyclic compound binding,heterocyclic compound binding,cellular protein metabolic process,metabolic process,protein metabolic process,protein phosphorylation,multi-organism process,biological_process,phosphorylation,cellular metabolic process,primary metabolic process,protein kinase activity,catalytic activity,organic substance metabolic process,macromolecule modification,phosphotransferase activity, alcohol group as acceptor,molecular_function,cellular protein modification process,protein modification process,transferase activity, transferring phosphorus-containing groups,kinase activity,single-organism process,single-organism cellular process,phosphate-containing compound metabolic process,phosphorus metabolic process,transferase activity,cellular process,protein serine/threonine kinase activity,cell communication","--","--"]
["TCONS_00195403","XLOC_139199","9:66268717-66270455",{"v":5e-05,"d":"5.00E-05"},0.00428946,"Novel_lncRNA","co_expression","Solyc10g008330.2","GO:0006952,GO:0009607,GO:0006950,GO:0008150,GO:0050896","defense response,response to biotic stimulus,response to stress,biological_process,response to stimulus","--","--"]
["TCONS_00195403","XLOC_139199","9:66268717-66270455",{"v":5e-05,"d":"5.00E-05"},0.00428946,"Novel_lncRNA","co_expression","Solyc09g005030.1","GO:0003677,GO:0003682,GO:0005488,GO:0097159,GO:1901363,GO:0003676,GO:0003674","DNA binding,chromatin binding,binding,organic cyclic compound binding,heterocyclic compound binding,nucleic acid binding,molecular_function","--","--"]
["TCONS_00190110","XLOC_134815","4:16278737-16281202",0.00105,0.0410637,"Novel_lncRNA","co_location","Solyc04g028380.1","GO:0008146,GO:0016782,GO:0003674,GO:0016740,GO:0003824","sulfotransferase activity,transferase activity, transferring sulfur-containing groups,molecular_function,transferase activity,catalytic activity","--","--"]
["TCONS_00190110","XLOC_134815","4:16278737-16281202",0.00105,0.0410637,"Novel_lncRNA","co_expression","Solyc01g068260.2","GO:0007143,GO:0006950,GO:0007126,GO:0000003,GO:0048610,GO:0044699,GO:0051321,GO:0050896,GO:0006974,GO:0009987,GO:0022402,GO:0007049,GO:0033554,GO:0044763,GO:0008150,GO:0051716","female meiosis,response to stress,meiosis,reproduction,cellular process involved in reproduction,single-organism process,meiotic cell cycle,response to stimulus,response to DNA damage stimulus,cellular process,cell cycle process,cell cycle,cellular response to stress,single-organism cellular process,biological_process,cellular response to stimulus","--","--"]
["TCONS_00190110","XLOC_134815","4:16278737-16281202",0.00105,0.0410637,"Novel_lncRNA","co_expression","Solyc09g019970.2","GO:0005634,GO:0003824,GO:0008152,GO:0003674,GO:0006807,GO:0071704,GO:0000956,GO:0016070,GO:1901360,GO:0044237,GO:0006725,GO:0044238,GO:0008150,GO:0046483,GO:0006139,GO:0006402,GO:0034641,GO:0004843,GO:0019783,GO:0006401,GO:0090304,GO:0070647,GO:0043231,GO:0043227,GO:0009987,GO:0044270,GO:0046700,GO:0044260,GO:0034655,GO:0070646,GO:0016071,GO:0019439,GO:0006464,GO:0036211,GO:1901361,GO:0043170,GO:0016787,GO:0043229,GO:0043226,GO:0016579,GO:1901575,GO:0009056,GO:0043412,GO:0044424,GO:0005575,GO:0005623,GO:0044464,GO:0009057,GO:0005622,GO:0044267,GO:0006511,GO:0019941,GO:0043632,GO:0044248,GO:0070011,GO:0008233,GO:0044265,GO:0051603,GO:0044257,GO:0019538,GO:0008234,GO:0006508,GO:0030163","nucleus,catalytic activity,metabolic process,molecular_function,nitrogen compound metabolic process,organic substance metabolic process,nuclear-transcribed mRNA catabolic process,RNA metabolic process,organic cyclic compound metabolic process,cellular metabolic process,cellular aromatic compound metabolic process,primary metabolic process,biological_process,heterocycle metabolic process,nucleobase-containing compound metabolic process,mRNA catabolic process,cellular nitrogen compound metabolic process,ubiquitin-specific protease activity,small conjugating protein-specific protease activity,RNA catabolic process,nucleic acid metabolic process,protein modification by small protein conjugation or removal,intracellular membrane-bounded organelle,membrane-bounded organelle,cellular process,cellular nitrogen compound catabolic process,heterocycle catabolic process,cellular macromolecule metabolic process,nucleobase-containing compound catabolic process,protein modification by small protein removal,mRNA metabolic process,aromatic compound catabolic process,cellular protein modification process,protein modification process,organic cyclic compound catabolic process,macromolecule metabolic process,hydrolase activity,intracellular organelle,organelle,protein deubiquitination,organic substance catabolic process,catabolic process,macromolecule modification,intracellular part,cellular_component,cell,cell part,macromolecule catabolic process,intracellular,cellular protein metabolic process,ubiquitin-dependent protein catabolic process,modification-dependent protein catabolic process,modification-dependent macromolecule catabolic process,cellular catabolic process,peptidase activity, acting on L-amino acid peptides,peptidase activity,cellular macromolecule catabolic process,proteolysis involved in cellular protein catabolic process,cellular protein catabolic process,protein metabolic process,cysteine-type peptidase activity,proteolysis,protein catabolic process","--","--"]
["TCONS_00190110","XLOC_134815","4:16278737-16281202",0.00105,0.0410637,"Novel_lncRNA","co_expression","Solyc11g066830.1","GO:0043231,GO:0043227,GO:0005634,GO:0003676,GO:0043229,GO:0043226,GO:0005575,GO:0003674,GO:0044424,GO:0046872,GO:0043169,GO:0005622,GO:0005623,GO:0044464,GO:0043167,GO:0005488,GO:0097159,GO:1901363,GO:0003723,GO:0036094,GO:0000166,GO:1901265","intracellular membrane-bounded organelle,membrane-bounded organelle,nucleus,nucleic acid binding,intracellular organelle,organelle,cellular_component,molecular_function,intracellular part,metal ion binding,cation binding,intracellular,cell,cell part,ion binding,binding,organic cyclic compound binding,heterocyclic compound binding,RNA binding,small molecule binding,nucleotide binding,nucleoside phosphate binding","sly03040","Spliceosome"]
["TCONS_00125195","XLOC_087436","11:45403858-45404930",{"v":5e-05,"d":"5.00E-05"},0.00428946,"Novel_lncRNA","co_location","Solyc11g056400.1","--","--","sly03010","Ribosome"]
["TCONS_00125195","XLOC_087436","11:45403858-45404930",{"v":5e-05,"d":"5.00E-05"},0.00428946,"Novel_lncRNA","co_location","Solyc11g056360.1","GO:0030529,GO:0005840,GO:0003735,GO:0032991,GO:0005198,GO:0005575,GO:0006412,GO:0044267,GO:0003674,GO:0043228,GO:0043232,GO:0005737,GO:0044237,GO:0019538,GO:0008152,GO:0044391,GO:0005623,GO:0044464,GO:0044444,GO:0015935,GO:0008150,GO:0009987,GO:0044424,GO:0005622,GO:0009059,GO:0044260,GO:0010467,GO:0034645,GO:0071704,GO:0044249,GO:0044238,GO:0009058,GO:0043170,GO:1901576,GO:0043229,GO:0043226,GO:0044446,GO:0044422","ribonucleoprotein complex,ribosome,structural constituent of ribosome,macromolecular complex,structural molecule activity,cellular_component,translation,cellular protein metabolic process,molecular_function,non-membrane-bounded organelle,intracellular non-membrane-bounded organelle,cytoplasm,cellular metabolic process,protein metabolic process,metabolic process,ribosomal subunit,cell,cell part,cytoplasmic part,small ribosomal subunit,biological_process,cellular process,intracellular part,intracellular,macromolecule biosynthetic process,cellular macromolecule metabolic process,gene expression,cellular macromolecule biosynthetic process,organic substance metabolic process,cellular biosynthetic process,primary metabolic process,biosynthetic process,macromolecule metabolic process,organic substance biosynthetic process,intracellular organelle,organelle,intracellular organelle part,organelle part","sly03010","Ribosome"]
["TCONS_00125195","XLOC_087436","11:45403858-45404930",{"v":5e-05,"d":"5.00E-05"},0.00428946,"Novel_lncRNA","co_location","Solyc11g056480.1","GO:0030529,GO:0005840,GO:0003735,GO:0032991,GO:0005198,GO:0005575,GO:0006412,GO:0005488,GO:0044267,GO:0003723,GO:0003674,GO:0043228,GO:0043232,GO:0003676,GO:0005737,GO:0044237,GO:0019538,GO:0008152,GO:0005623,GO:0044464,GO:0044444,GO:0008150,GO:0097159,GO:1901363,GO:0009987,GO:0044424,GO:0005622,GO:0009059,GO:0044260,GO:0010467,GO:0034645,GO:0071704,GO:0044249,GO:0044238,GO:0009058,GO:0043170,GO:1901576,GO:0043229,GO:0043226","ribonucleoprotein complex,ribosome,structural constituent of ribosome,macromolecular complex,structural molecule activity,cellular_component,translation,binding,cellular protein metabolic process,RNA binding,molecular_function,non-membrane-bounded organelle,intracellular non-membrane-bounded organelle,nucleic acid binding,cytoplasm,cellular metabolic process,protein metabolic process,metabolic process,cell,cell part,cytoplasmic part,biological_process,organic cyclic compound binding,heterocyclic compound binding,cellular process,intracellular part,intracellular,macromolecule biosynthetic process,cellular macromolecule metabolic process,gene expression,cellular macromolecule biosynthetic process,organic substance metabolic process,cellular biosynthetic process,primary metabolic process,biosynthetic process,macromolecule metabolic process,organic substance biosynthetic process,intracellular organelle,organelle","sly03010","Ribosome"]
["TCONS_00125195","XLOC_087436","11:45403858-45404930",{"v":5e-05,"d":"5.00E-05"},0.00428946,"Novel_lncRNA","co_expression","Solyc11g009090.1","GO:0003676,GO:0097159,GO:1901363,GO:0005488,GO:0036094,GO:0000166,GO:1901265,GO:0003674","nucleic acid binding,organic cyclic compound binding,heterocyclic compound binding,binding,small molecule binding,nucleotide binding,nucleoside phosphate binding,molecular_function","sly03015","mRNA surveillance pathway"]
["TCONS_00125195","XLOC_087436","11:45403858-45404930",{"v":5e-05,"d":"5.00E-05"},0.00428946,"Novel_lncRNA","co_expression","Solyc09g055700.2","GO:0016787,GO:0003824,GO:0016788,GO:0003674","hydrolase activity,catalytic activity,hydrolase activity, acting on ester bonds,molecular_function","--","--"]
["TCONS_00123348","XLOC_085779","7:44222716-44225120",{"v":5e-05,"d":"5.00E-05"},0.00428946,"Novel_lncRNA","co_expression","Solyc08g080850.2","GO:0003824,GO:0097159,GO:1901363,GO:0005488,GO:0043167,GO:0004674,GO:0016740,GO:0003674,GO:0016772,GO:0036094,GO:0005524,GO:0035639,GO:0000166,GO:1901265,GO:0016301,GO:0032553,GO:0032559,GO:0030554,GO:0043168,GO:0001883,GO:0032550,GO:0032555,GO:0017076,GO:0032549,GO:0001882,GO:0016773,GO:0004672","catalytic activity,organic cyclic compound binding,heterocyclic compound binding,binding,ion binding,protein serine/threonine kinase activity,transferase activity,molecular_function,transferase activity, transferring phosphorus-containing groups,small molecule binding,ATP binding,purine ribonucleoside triphosphate binding,nucleotide binding,nucleoside phosphate binding,kinase activity,ribonucleotide binding,adenyl ribonucleotide binding,adenyl nucleotide binding,anion binding,purine nucleoside binding,purine ribonucleoside binding,purine ribonucleotide binding,purine nucleotide binding,ribonucleoside binding,nucleoside binding,phosphotransferase activity, alcohol group as acceptor,protein kinase activity","sly03008","Ribosome biogenesis in eukaryotes"]
["TCONS_00123348","XLOC_085779","7:44222716-44225120",{"v":5e-05,"d":"5.00E-05"},0.00428946,"Novel_lncRNA","co_expression","Solyc08g006670.2","GO:0044446,GO:0044422,GO:0043231,GO:0043227,GO:0005634,GO:0043229,GO:0043226,GO:0005575,GO:0044424,GO:0005622,GO:0005623,GO:0044464,GO:0044428,GO:0016592,GO:0032991,GO:0043234,GO:0044451,GO:0005654,GO:0043233,GO:0070013,GO:0031974,GO:0031981","intracellular organelle part,organelle part,intracellular membrane-bounded organelle,membrane-bounded organelle,nucleus,intracellular organelle,organelle,cellular_component,intracellular part,intracellular,cell,cell part,nuclear part,mediator complex,macromolecular complex,protein complex,nucleoplasm part,nucleoplasm,organelle lumen,intracellular organelle lumen,membrane-enclosed lumen,nuclear lumen","--","--"]
["TCONS_00123348","XLOC_085779","7:44222716-44225120",{"v":5e-05,"d":"5.00E-05"},0.00428946,"Novel_lncRNA","co_expression","Solyc04g072640.2","GO:0005488,GO:0005515,GO:0003674","binding,protein binding,molecular_function","--","--"]
["TCONS_00123348","XLOC_085779","7:44222716-44225120",{"v":5e-05,"d":"5.00E-05"},0.00428946,"Novel_lncRNA","co_expression","Solyc08g081330.2","GO:0000003,GO:0048856,GO:0009793,GO:0044699,GO:0048608,GO:0061458,GO:0048731,GO:0009790,GO:0010154,GO:0044424,GO:0016787,GO:0007275,GO:0003006,GO:0043229,GO:0043226,GO:0044707,GO:0032501,GO:0009987,GO:0048316,GO:0022414,GO:0005622,GO:0032502,GO:0044446,GO:0044422,GO:0044767,GO:0044763,GO:0009791,GO:0005623,GO:0044464,GO:0008150,GO:0003924,GO:0032991,GO:0043234,GO:0005856,GO:0003824,GO:0016462,GO:0016818,GO:0044430,GO:0017111,GO:0016817,GO:0043228,GO:0043232,GO:0005874,GO:0051301,GO:0005575,GO:0015630,GO:0003674","reproduction,anatomical structure development,embryo development ending in seed dormancy,single-organism process,reproductive structure development,reproductive system development,system development,embryo development,fruit development,intracellular part,hydrolase activity,multicellular organismal development,developmental process involved in reproduction,intracellular organelle,organelle,single-multicellular organism process,multicellular organismal process,cellular process,seed development,reproductive process,intracellular,developmental process,intracellular organelle part,organelle part,single-organism developmental process,single-organism cellular process,post-embryonic development,cell,cell part,biological_process,GTPase activity,macromolecular complex,protein complex,cytoskeleton,catalytic activity,pyrophosphatase activity,hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides,cytoskeletal part,nucleoside-triphosphatase activity,hydrolase activity, acting on acid anhydrides,non-membrane-bounded organelle,intracellular non-membrane-bounded organelle,microtubule,cell division,cellular_component,microtubule cytoskeleton,molecular_function","--","--"]
["TCONS_00129734","XLOC_090571","9:11309985-11312281",0.00095,0.0384387,"Novel_lncRNA","co_location","Solyc09g015860.1","GO:0008152,GO:0008150,GO:0044238,GO:0071704,GO:0034645,GO:0010467,GO:0009059,GO:0043170,GO:0003674,GO:0019843,GO:0097159,GO:1901363,GO:0044249,GO:1901576,GO:0003676,GO:0044237,GO:0030529,GO:0044260,GO:0005840,GO:0009058,GO:0019538,GO:0044267,GO:0005198,GO:0005488,GO:0003735,GO:0005623,GO:0044464,GO:0005575,GO:0009987,GO:0043228,GO:0043232,GO:0006412,GO:0032991,GO:0003723,GO:0043229,GO:0043226,GO:0044424,GO:0005622,GO:0044444,GO:0005737","metabolic process,biological_process,primary metabolic process,organic substance metabolic process,cellular macromolecule biosynthetic process,gene expression,macromolecule biosynthetic process,macromolecule metabolic process,molecular_function,rRNA binding,organic cyclic compound binding,heterocyclic compound binding,cellular biosynthetic process,organic substance biosynthetic process,nucleic acid binding,cellular metabolic process,ribonucleoprotein complex,cellular macromolecule metabolic process,ribosome,biosynthetic process,protein metabolic process,cellular protein metabolic process,structural molecule activity,binding,structural constituent of ribosome,cell,cell part,cellular_component,cellular process,non-membrane-bounded organelle,intracellular non-membrane-bounded organelle,translation,macromolecular complex,RNA binding,intracellular organelle,organelle,intracellular part,intracellular,cytoplasmic part,cytoplasm","sly03010","Ribosome"]
["TCONS_00129734","XLOC_090571","9:11309985-11312281",0.00095,0.0384387,"Novel_lncRNA","co_location","Solyc09g015850.2","--","--","sly03010","Ribosome"]
["TCONS_00129734","XLOC_090571","9:11309985-11312281",0.00095,0.0384387,"Novel_lncRNA","co_expression","Solyc06g010060.1","GO:0005784,GO:0071256,GO:0043231,GO:0043227,GO:0005791,GO:0030867,GO:0044432,GO:0044424,GO:0005622,GO:0005789,GO:0042175,GO:0031090,GO:0044446,GO:0044422,GO:0043229,GO:0043226,GO:0012505,GO:0005783,GO:0005623,GO:0044464,GO:0044444,GO:0005737,GO:0043234,GO:0044699,GO:0032991,GO:0008150,GO:0009987,GO:0005575,GO:0033036,GO:0006886,GO:0070727,GO:0044763,GO:0015031,GO:0045184,GO:0071702,GO:0034613,GO:0008104,GO:0046907,GO:0006810,GO:0016020,GO:0051234,GO:0051179,GO:0051649,GO:0051641,GO:0044425","Sec61 translocon complex,translocon complex,intracellular membrane-bounded organelle,membrane-bounded organelle,rough endoplasmic reticulum,rough endoplasmic reticulum membrane,endoplasmic reticulum part,intracellular part,intracellular,endoplasmic reticulum membrane,nuclear outer membrane-endoplasmic reticulum membrane network,organelle membrane,intracellular organelle part,organelle part,intracellular organelle,organelle,endomembrane system,endoplasmic reticulum,cell,cell part,cytoplasmic part,cytoplasm,protein complex,single-organism process,macromolecular complex,biological_process,cellular process,cellular_component,macromolecule localization,intracellular protein transport,cellular macromolecule localization,single-organism cellular process,protein transport,establishment of protein localization,organic substance transport,cellular protein localization,protein localization,intracellular transport,transport,membrane,establishment of localization,localization,establishment of localization in cell,cellular localization,membrane part","sly04141,sly03060,sly04145","Protein processing in endoplasmic reticulum,Protein export,Phagosome"]
["TCONS_00129734","XLOC_090571","9:11309985-11312281",0.00095,0.0384387,"Novel_lncRNA","co_expression","Solyc01g008360.2","GO:0005488,GO:0097159,GO:1901363,GO:0003676,GO:0003674,GO:0036094,GO:0000166,GO:1901265","binding,organic cyclic compound binding,heterocyclic compound binding,nucleic acid binding,molecular_function,small molecule binding,nucleotide binding,nucleoside phosphate binding","sly03040","Spliceosome"]
["TCONS_00129734","XLOC_090571","9:11309985-11312281",0.00095,0.0384387,"Novel_lncRNA","co_expression","Solyc07g063900.2","GO:0043231,GO:0043227,GO:0003676,GO:0044424,GO:0005622,GO:0005739,GO:0043229,GO:0043226,GO:0005623,GO:0044464,GO:0044444,GO:0005737,GO:0005575,GO:0097159,GO:1901363,GO:0005488,GO:0036094,GO:0000166,GO:1901265,GO:0003674","intracellular membrane-bounded organelle,membrane-bounded organelle,nucleic acid binding,intracellular part,intracellular,mitochondrion,intracellular organelle,organelle,cell,cell part,cytoplasmic part,cytoplasm,cellular_component,organic cyclic compound binding,heterocyclic compound binding,binding,small molecule binding,nucleotide binding,nucleoside phosphate binding,molecular_function","--","--"]
["TCONS_00129734","XLOC_090571","9:11309985-11312281",0.00095,0.0384387,"Novel_lncRNA","co_expression","Solyc07g053690.2","--","--","sly03030,sly03440,sly03430,sly03420","DNA replication,Homologous recombination,Mismatch repair,Nucleotide excision repair"]
["TCONS_00129734","XLOC_090571","9:11309985-11312281",0.00095,0.0384387,"Novel_lncRNA","co_expression","Solyc10g083870.1","GO:0005515,GO:0005488,GO:0003674","protein binding,binding,molecular_function","--","--"]
["TCONS_00163117","XLOC_115062","7:57883451-57891395",0.00055,0.0263241,"Novel_lncRNA","co_location","Solyc07g044780.2","GO:0005488,GO:0003674,GO:0008270,GO:0043167,GO:0046914,GO:0046872,GO:0043169","binding,molecular_function,zinc ion binding,ion binding,transition metal ion binding,metal ion binding,cation binding","--","--"]
["TCONS_00163117","XLOC_115062","7:57883451-57891395",0.00055,0.0263241,"Novel_lncRNA","co_location","Solyc07g044920.1","GO:0005488,GO:0005515,GO:0003674","binding,protein binding,molecular_function","--","--"]
["TCONS_00163117","XLOC_115062","7:57883451-57891395",0.00055,0.0263241,"Novel_lncRNA","co_location","Solyc07g044820.1","GO:0016021,GO:0031224,GO:0044425,GO:0005737,GO:0005575,GO:0016020,GO:0044444,GO:0044723,GO:0005623,GO:0044464,GO:0005975,GO:0008378,GO:0044424,GO:0005622,GO:0009058,GO:0034645,GO:0009059,GO:0044249,GO:1901576,GO:0005794,GO:0043229,GO:0043226,GO:0016758,GO:0043231,GO:0043227,GO:1901135,GO:0006486,GO:0043413,GO:0009101,GO:0009100,GO:0070085,GO:0016757,GO:0008150,GO:1901137,GO:0044238,GO:0044237,GO:0044260,GO:0008152,GO:0003674,GO:0071704,GO:0043170,GO:0009987,GO:0006464,GO:0036211,GO:0016740,GO:0043412,GO:0019538,GO:0044267,GO:0003824","integral to membrane,intrinsic to membrane,membrane part,cytoplasm,cellular_component,membrane,cytoplasmic part,single-organism carbohydrate metabolic process,cell,cell part,carbohydrate metabolic process,galactosyltransferase activity,intracellular part,intracellular,biosynthetic process,cellular macromolecule biosynthetic process,macromolecule biosynthetic process,cellular biosynthetic process,organic substance biosynthetic process,Golgi apparatus,intracellular organelle,organelle,transferase activity, transferring hexosyl groups,intracellular membrane-bounded organelle,membrane-bounded organelle,carbohydrate derivative metabolic process,protein glycosylation,macromolecule glycosylation,glycoprotein biosynthetic process,glycoprotein metabolic process,glycosylation,transferase activity, transferring glycosyl groups,biological_process,carbohydrate derivative biosynthetic process,primary metabolic process,cellular metabolic process,cellular macromolecule metabolic process,metabolic process,molecular_function,organic substance metabolic process,macromolecule metabolic process,cellular process,cellular protein modification process,protein modification process,transferase activity,macromolecule modification,protein metabolic process,cellular protein metabolic process,catalytic activity","--","--"]
["TCONS_00163117","XLOC_115062","7:57883451-57891395",0.00055,0.0263241,"Novel_lncRNA","co_location","Solyc07g044830.2","GO:0050789,GO:0065007,GO:0006301,GO:0050794,GO:0006725,GO:0097159,GO:1901363,GO:0006139,GO:0006807,GO:1901360,GO:0046483,GO:0006281,GO:0005488,GO:0090304,GO:0046906,GO:0006974,GO:0034641,GO:0044699,GO:0006950,GO:0008150,GO:0050896,GO:0020037,GO:0051716,GO:0044238,GO:0044237,GO:0048523,GO:0033554,GO:0044260,GO:0008152,GO:0003674,GO:0071704,GO:0043170,GO:0006259,GO:0009987,GO:0048519,GO:0044763","regulation of biological process,biological regulation,postreplication repair,regulation of cellular process,cellular aromatic compound metabolic process,organic cyclic compound binding,heterocyclic compound binding,nucleobase-containing compound metabolic process,nitrogen compound metabolic process,organic cyclic compound metabolic process,heterocycle metabolic process,DNA repair,binding,nucleic acid metabolic process,tetrapyrrole binding,response to DNA damage stimulus,cellular nitrogen compound metabolic process,single-organism process,response to stress,biological_process,response to stimulus,heme binding,cellular response to stimulus,primary metabolic process,cellular metabolic process,negative regulation of cellular process,cellular response to stress,cellular macromolecule metabolic process,metabolic process,molecular_function,organic substance metabolic process,macromolecule metabolic process,DNA metabolic process,cellular process,negative regulation of biological process,single-organism cellular process","--","--"]
["TCONS_00163117","XLOC_115062","7:57883451-57891395",0.00055,0.0263241,"Novel_lncRNA","co_location","Solyc07g044800.2","GO:0097159,GO:1901363,GO:0005488,GO:0001883,GO:0032550,GO:0032555,GO:0017076,GO:0032549,GO:0001882,GO:0032553,GO:0032559,GO:0030554,GO:0043168,GO:0000166,GO:1901265,GO:0036094,GO:0043531,GO:0003674,GO:0043167","organic cyclic compound binding,heterocyclic compound binding,binding,purine nucleoside binding,purine ribonucleoside binding,purine ribonucleotide binding,purine nucleotide binding,ribonucleoside binding,nucleoside binding,ribonucleotide binding,adenyl ribonucleotide binding,adenyl nucleotide binding,anion binding,nucleotide binding,nucleoside phosphate binding,small molecule binding,ADP binding,molecular_function,ion binding","--","--"]
["TCONS_00163117","XLOC_115062","7:57883451-57891395",0.00055,0.0263241,"Novel_lncRNA","co_location","Solyc07g044840.2","GO:0006007,GO:0019320,GO:0046365,GO:0006006,GO:0005737,GO:0005575,GO:0044724,GO:0004619,GO:0019318,GO:0005996,GO:0016866,GO:0016052,GO:0044723,GO:0016868,GO:0005623,GO:0044464,GO:0005975,GO:0044424,GO:0005622,GO:0030145,GO:0016853,GO:0005488,GO:0008150,GO:1901575,GO:0044238,GO:0009056,GO:0008152,GO:0003674,GO:0071704,GO:0043167,GO:0046914,GO:0046872,GO:0043169,GO:0003824","glucose catabolic process,hexose catabolic process,monosaccharide catabolic process,glucose metabolic process,cytoplasm,cellular_component,single-organism carbohydrate catabolic process,phosphoglycerate mutase activity,hexose metabolic process,monosaccharide metabolic process,intramolecular transferase activity,carbohydrate catabolic process,single-organism carbohydrate metabolic process,intramolecular transferase activity, phosphotransferases,cell,cell part,carbohydrate metabolic process,intracellular part,intracellular,manganese ion binding,isomerase activity,binding,biological_process,organic substance catabolic process,primary metabolic process,catabolic process,metabolic process,molecular_function,organic substance metabolic process,ion binding,transition metal ion binding,metal ion binding,cation binding,catalytic activity","sly01200,sly01230,sly00010,sly00260,sly01110,sly01100","Carbon metabolism,Biosynthesis of amino acids,Glycolysis / Gluconeogenesis,Glycine, serine and threonine metabolism,Biosynthesis of secondary metabolites,Metabolic pathways"]
["TCONS_00163117","XLOC_115062","7:57883451-57891395",0.00055,0.0263241,"Novel_lncRNA","co_location","Solyc07g044930.2","GO:0004386,GO:0003676,GO:0017111,GO:0097159,GO:1901363,GO:0016462,GO:0016818,GO:0016817,GO:0035639,GO:0005488,GO:0001883,GO:0032550,GO:0032555,GO:0017076,GO:0032549,GO:0001882,GO:0032553,GO:0005524,GO:0032559,GO:0030554,GO:0043168,GO:0000166,GO:1901265,GO:0036094,GO:0016787,GO:0003674,GO:0043167,GO:0003824","helicase activity,nucleic acid binding,nucleoside-triphosphatase activity,organic cyclic compound binding,heterocyclic compound binding,pyrophosphatase activity,hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides,hydrolase activity, acting on acid anhydrides,purine ribonucleoside triphosphate binding,binding,purine nucleoside binding,purine ribonucleoside binding,purine ribonucleotide binding,purine nucleotide binding,ribonucleoside binding,nucleoside binding,ribonucleotide binding,ATP binding,adenyl ribonucleotide binding,adenyl nucleotide binding,anion binding,nucleotide binding,nucleoside phosphate binding,small molecule binding,hydrolase activity,molecular_function,ion binding,catalytic activity","--","--"]
["TCONS_00058627","XLOC_042446","12:38353321-38354925",0.0014,0.0498795,"Novel_lncRNA","co_location","Solyc12g044480.1","GO:0008234,GO:0003674,GO:0006508,GO:0019538,GO:0008152,GO:0070011,GO:0008233,GO:0008150,GO:0003824,GO:0016787,GO:0071704,GO:0044238,GO:0043170","cysteine-type peptidase activity,molecular_function,proteolysis,protein metabolic process,metabolic process,peptidase activity, acting on L-amino acid peptides,peptidase activity,biological_process,catalytic activity,hydrolase activity,organic substance metabolic process,primary metabolic process,macromolecule metabolic process","--","--"]
["TCONS_00058627","XLOC_042446","12:38353321-38354925",0.0014,0.0498795,"Novel_lncRNA","co_location","Solyc12g044520.1","GO:0005515,GO:0005488,GO:0003674","protein binding,binding,molecular_function","sly00480","Glutathione metabolism"]
["TCONS_00058627","XLOC_042446","12:38353321-38354925",0.0014,0.0498795,"Novel_lncRNA","co_location","Solyc12g044540.1","GO:0005488,GO:0003674,GO:0003676,GO:0097159,GO:1901363","binding,molecular_function,nucleic acid binding,organic cyclic compound binding,heterocyclic compound binding","--","--"]
["TCONS_00076846","XLOC_055196","8:7731911-7735026",{"v":5e-05,"d":"5.00E-05"},0.00428946,"Novel_lncRNA","co_expression","Solyc11g066830.1","GO:0043231,GO:0043227,GO:0005634,GO:0003676,GO:0043229,GO:0043226,GO:0005575,GO:0003674,GO:0044424,GO:0046872,GO:0043169,GO:0005622,GO:0005623,GO:0044464,GO:0043167,GO:0005488,GO:0097159,GO:1901363,GO:0003723,GO:0036094,GO:0000166,GO:1901265","intracellular membrane-bounded organelle,membrane-bounded organelle,nucleus,nucleic acid binding,intracellular organelle,organelle,cellular_component,molecular_function,intracellular part,metal ion binding,cation binding,intracellular,cell,cell part,ion binding,binding,organic cyclic compound binding,heterocyclic compound binding,RNA binding,small molecule binding,nucleotide binding,nucleoside phosphate binding","sly03040","Spliceosome"]
["TCONS_00076846","XLOC_055196","8:7731911-7735026",{"v":5e-05,"d":"5.00E-05"},0.00428946,"Novel_lncRNA","co_expression","Solyc10g078190.1","GO:0010468,GO:0019222,GO:0050789,GO:0060255,GO:0065007,GO:0006305,GO:0006306,GO:0044728,GO:0006304,GO:0040029,GO:0008152,GO:0006807,GO:0071704,GO:1901360,GO:0044237,GO:0006725,GO:0044238,GO:0008150,GO:0046483,GO:0006139,GO:0010467,GO:0034641,GO:0090304,GO:0043414,GO:0032259,GO:0009987,GO:0044260,GO:0043170,GO:0043412,GO:0006259","regulation of gene expression,regulation of metabolic process,regulation of biological process,regulation of macromolecule metabolic process,biological regulation,DNA alkylation,DNA methylation,DNA methylation or demethylation,DNA modification,regulation of gene expression, epigenetic,metabolic process,nitrogen compound metabolic process,organic substance metabolic process,organic cyclic compound metabolic process,cellular metabolic process,cellular aromatic compound metabolic process,primary metabolic process,biological_process,heterocycle metabolic process,nucleobase-containing compound metabolic process,gene expression,cellular nitrogen compound metabolic process,nucleic acid metabolic process,macromolecule methylation,methylation,cellular process,cellular macromolecule metabolic process,macromolecule metabolic process,macromolecule modification,DNA metabolic process","--","--"]
["TCONS_00076846","XLOC_055196","8:7731911-7735026",{"v":5e-05,"d":"5.00E-05"},0.00428946,"Novel_lncRNA","co_expression","Solyc01g057780.2","GO:0044434,GO:0044435,GO:0009570,GO:0009532,GO:0044446,GO:0044422,GO:0009507,GO:0009536,GO:0008150,GO:0043231,GO:0043227,GO:0043229,GO:0043226,GO:0005737,GO:0005575,GO:0003674,GO:0044424,GO:0044699,GO:0046872,GO:0043169,GO:0005622,GO:0005623,GO:0044464,GO:0009658,GO:0043167,GO:0009987,GO:0071840,GO:0044444,GO:0044763,GO:0005488,GO:0016043,GO:0009657,GO:0006996,GO:0046914,GO:0008270","chloroplast part,plastid part,chloroplast stroma,plastid stroma,intracellular organelle part,organelle part,chloroplast,plastid,biological_process,intracellular membrane-bounded organelle,membrane-bounded organelle,intracellular organelle,organelle,cytoplasm,cellular_component,molecular_function,intracellular part,single-organism process,metal ion binding,cation binding,intracellular,cell,cell part,chloroplast organization,ion binding,cellular process,cellular component organization or biogenesis,cytoplasmic part,single-organism cellular process,binding,cellular component organization,plastid organization,organelle organization,transition metal ion binding,zinc ion binding","--","--"]
["TCONS_00076846","XLOC_055196","8:7731911-7735026",{"v":5e-05,"d":"5.00E-05"},0.00428946,"Novel_lncRNA","co_expression","Solyc02g087290.2","GO:0044444,GO:0015923,GO:0005737,GO:0043231,GO:0043227,GO:0044237,GO:0006013,GO:0044249,GO:0044238,GO:0009058,GO:0004559,GO:1901576,GO:0044424,GO:0016787,GO:0071704,GO:0005996,GO:0046872,GO:0043229,GO:0043226,GO:0043169,GO:0008152,GO:0009987,GO:0019318,GO:0030246,GO:0005622,GO:0006487,GO:0005768,GO:0005975,GO:0005623,GO:0044464,GO:0070085,GO:0046914,GO:0008150,GO:0044260,GO:0003824,GO:0005802,GO:0044723,GO:1901137,GO:0034645,GO:0043170,GO:0006486,GO:0043413,GO:0009101,GO:0008270,GO:0009100,GO:0009059,GO:0044267,GO:0004553,GO:0005575,GO:1901135,GO:0005488,GO:0019538,GO:0016798,GO:0043167,GO:0003674,GO:0043412,GO:0006464,GO:0036211","cytoplasmic part,mannosidase activity,cytoplasm,intracellular membrane-bounded organelle,membrane-bounded organelle,cellular metabolic process,mannose metabolic process,cellular biosynthetic process,primary metabolic process,biosynthetic process,alpha-mannosidase activity,organic substance biosynthetic process,intracellular part,hydrolase activity,organic substance metabolic process,monosaccharide metabolic process,metal ion binding,intracellular organelle,organelle,cation binding,metabolic process,cellular process,hexose metabolic process,carbohydrate binding,intracellular,protein N-linked glycosylation,endosome,carbohydrate metabolic process,cell,cell part,glycosylation,transition metal ion binding,biological_process,cellular macromolecule metabolic process,catalytic activity,trans-Golgi network,single-organism carbohydrate metabolic process,carbohydrate derivative biosynthetic process,cellular macromolecule biosynthetic process,macromolecule metabolic process,protein glycosylation,macromolecule glycosylation,glycoprotein biosynthetic process,zinc ion binding,glycoprotein metabolic process,macromolecule biosynthetic process,cellular protein metabolic process,hydrolase activity, hydrolyzing O-glycosyl compounds,cellular_component,carbohydrate derivative metabolic process,binding,protein metabolic process,hydrolase activity, acting on glycosyl bonds,ion binding,molecular_function,macromolecule modification,cellular protein modification process,protein modification process","sly00510,sly01100","N-Glycan biosynthesis,Metabolic pathways"]
["TCONS_00076846","XLOC_055196","8:7731911-7735026",{"v":5e-05,"d":"5.00E-05"},0.00428946,"Novel_lncRNA","co_expression","Solyc08g007530.2","GO:0003676,GO:0097159,GO:1901363,GO:0005488,GO:0003677,GO:0003674","nucleic acid binding,organic cyclic compound binding,heterocyclic compound binding,binding,DNA binding,molecular_function","--","--"]
["TCONS_00125390","XLOC_087617","5:30205477-30208471",{"v":5e-05,"d":"5.00E-05"},0.00428946,"Novel_lncRNA","co_location","Solyc05g024010.2","GO:0005623,GO:0044464,GO:0005575,GO:0005622,GO:0043169,GO:0003674,GO:0046914,GO:0046872,GO:0005515,GO:0043167,GO:0008270,GO:0005488","cell,cell part,cellular_component,intracellular,cation binding,molecular_function,transition metal ion binding,metal ion binding,protein binding,ion binding,zinc ion binding,binding","--","--"]
["TCONS_00125390","XLOC_087617","5:30205477-30208471",{"v":5e-05,"d":"5.00E-05"},0.00428946,"Novel_lncRNA","co_expression","Solyc08g005970.2","GO:0009933,GO:0048532,GO:0006406,GO:0006405,GO:0051028,GO:0042221,GO:0051168,GO:0006403,GO:0050657,GO:0050658,GO:0051236,GO:0010219,GO:0010220,GO:0009845,GO:0090351,GO:0044424,GO:0010033,GO:0018195,GO:0018216,GO:0035246,GO:0007165,GO:0010162,GO:0022611,GO:0010074,GO:0005622,GO:0050896,GO:0044700,GO:0023052,GO:0010073,GO:0019827,GO:0045596,GO:0048864,GO:0015931,GO:0048863,GO:0010431,GO:0005623,GO:0044464,GO:0006950,GO:0007154,GO:1901701,GO:0048507,GO:0009888,GO:0050789,GO:0051716,GO:0005829,GO:0006913,GO:0051169,GO:0065007,GO:0071310,GO:0050826,GO:0050794,GO:0019915,GO:0019953,GO:0009909,GO:0032504,GO:0045595,GO:1901700,GO:0048583,GO:0009756,GO:0010182,GO:0009266,GO:0048831,GO:0051093,GO:0071322,GO:2000241,GO:0070887,GO:0018193,GO:0048518,GO:0009887,GO:0048580,GO:0048449,GO:0010228,GO:0007292,GO:0009560,GO:0022412,GO:0048444,GO:0048563,GO:0009165,GO:0006164,GO:0044444,GO:1901293,GO:2000026,GO:0071705,GO:0048609,GO:0007276,GO:0051239,GO:0009653,GO:0005737,GO:0006325,GO:0044702,GO:0034654,GO:0072522,GO:0048468,GO:0010154,GO:0009886,GO:0048645,GO:0030154,GO:0009561,GO:0010048,GO:0009640,GO:0050793,GO:0009793,GO:0006163,GO:0048367,GO:0048584,GO:0005575,GO:0032446,GO:0019438,GO:0010876,GO:0044763,GO:0008276,GO:0051276,GO:0009790,GO:0044710,GO:0048610,GO:0009743,GO:0009553,GO:0048523,GO:0009409,GO:0048513,GO:0044271,GO:0006810,GO:0006139,GO:0018130,GO:0080134,GO:0009628,GO:0003674,GO:0072521,GO:0048731,GO:0048316,GO:0048646,GO:0051234,GO:1901362,GO:0044699,GO:0009639,GO:0016482,GO:0048869,GO:1901566,GO:0006479,GO:0008213,GO:0009908,GO:0016568,GO:0051179,GO:0044767,GO:0006807,GO:0048519,GO:0006725,GO:0008168,GO:0008150,GO:0034641,GO:0046483,GO:0006996,GO:0016567,GO:0016741,GO:0071840,GO:0090407,GO:0000003,GO:0009117,GO:0044281,GO:0009058,GO:0006753,GO:0070647,GO:1901360,GO:0048856,GO:0016570,GO:0048608,GO:0061458,GO:0048437,GO:0008152,GO:0048229,GO:0003006,GO:0007275,GO:0032502,GO:0044260,GO:0044249,GO:0016569,GO:0055086,GO:0009791,GO:0033036,GO:1901564,GO:0048569,GO:0032501,GO:1901576,GO:0043414,GO:0022414,GO:0032259,GO:0044707,GO:0019637,GO:0016043,GO:0003824,GO:0009314,GO:0044237,GO:0071702,GO:0043170,GO:0016740,GO:0046907,GO:0009987,GO:0009416,GO:0051649,GO:0044267,GO:0071704,GO:0044238,GO:0051641,GO:0006796,GO:0006793,GO:0019538,GO:0006464,GO:0036211,GO:0043412","meristem structural organization,anatomical structure arrangement,mRNA export from nucleus,RNA export from nucleus,mRNA transport,response to chemical stimulus,nuclear export,RNA localization,nucleic acid transport,RNA transport,establishment of RNA localization,regulation of vernalization response,positive regulation of vernalization response,seed germination,seedling development,intracellular part,response to organic substance,peptidyl-arginine modification,peptidyl-arginine methylation,peptidyl-arginine N-methylation,signal transduction,seed dormancy process,dormancy process,maintenance of meristem identity,intracellular,response to stimulus,single organism signaling,signaling,meristem maintenance,stem cell maintenance,negative regulation of cell differentiation,stem cell development,nucleobase-containing compound transport,stem cell differentiation,seed maturation,cell,cell part,response to stress,cell communication,cellular response to oxygen-containing compound,meristem development,tissue development,regulation of biological process,cellular response to stimulus,cytosol,nucleocytoplasmic transport,nuclear transport,biological regulation,cellular response to organic substance,response to freezing,regulation of cellular process,lipid storage,sexual reproduction,regulation of flower development,multicellular organism reproduction,regulation of cell differentiation,response to oxygen-containing compound,regulation of response to stimulus,carbohydrate mediated signaling,sugar mediated signaling pathway,response to temperature stimulus,regulation of shoot system development,negative regulation of developmental process,cellular response to carbohydrate stimulus,regulation of reproductive process,cellular response to chemical stimulus,peptidyl-amino acid modification,positive regulation of biological process,organ morphogenesis,regulation of post-embryonic development,floral organ formation,vegetative to reproductive phase transition of meristem,female gamete generation,embryo sac egg cell differentiation,cellular process involved in reproduction in multicellular organism,floral organ morphogenesis,post-embryonic organ morphogenesis,nucleotide biosynthetic process,purine nucleotide biosynthetic process,cytoplasmic part,nucleoside phosphate biosynthetic process,regulation of multicellular organismal development,nitrogen compound transport,multicellular organismal reproductive process,gamete generation,regulation of multicellular organismal process,anatomical structure morphogenesis,cytoplasm,chromatin organization,single organism reproductive process,nucleobase-containing compound biosynthetic process,purine-containing compound biosynthetic process,cell development,fruit development,post-embryonic morphogenesis,organ formation,cell differentiation,megagametogenesis,vernalization response,photomorphogenesis,regulation of developmental process,embryo development ending in seed dormancy,purine nucleotide metabolic process,shoot system development,positive regulation of response to stimulus,cellular_component,protein modification by small protein conjugation,aromatic compound biosynthetic process,lipid localization,single-organism cellular process,protein methyltransferase activity,chromosome organization,embryo development,single-organism metabolic process,cellular process involved in reproduction,response to carbohydrate stimulus,embryo sac development,negative regulation of cellular process,response to cold,organ development,cellular nitrogen compound biosynthetic process,transport,nucleobase-containing compound metabolic process,heterocycle biosynthetic process,regulation of response to stress,response to abiotic stimulus,molecular_function,purine-containing compound metabolic process,system development,seed development,anatomical structure formation involved in morphogenesis,establishment of localization,organic cyclic compound biosynthetic process,single-organism process,response to red or far red light,cytoplasmic transport,cellular developmental process,organonitrogen compound biosynthetic process,protein methylation,protein alkylation,flower development,chromatin modification,localization,single-organism developmental process,nitrogen compound metabolic process,negative regulation of biological process,cellular aromatic compound metabolic process,methyltransferase activity,biological_process,cellular nitrogen compound metabolic process,heterocycle metabolic process,organelle organization,protein ubiquitination,transferase activity, transferring one-carbon groups,cellular component organization or biogenesis,organophosphate biosynthetic process,reproduction,nucleotide metabolic process,small molecule metabolic process,biosynthetic process,nucleoside phosphate metabolic process,protein modification by small protein conjugation or removal,organic cyclic compound metabolic process,anatomical structure development,histone modification,reproductive structure development,reproductive system development,floral organ development,metabolic process,gametophyte development,developmental process involved in reproduction,multicellular organismal development,developmental process,cellular macromolecule metabolic process,cellular biosynthetic process,covalent chromatin modification,nucleobase-containing small molecule metabolic process,post-embryonic development,macromolecule localization,organonitrogen compound metabolic process,post-embryonic organ development,multicellular organismal process,organic substance biosynthetic process,macromolecule methylation,reproductive process,methylation,single-multicellular organism process,organophosphate metabolic process,cellular component organization,catalytic activity,response to radiation,cellular metabolic process,organic substance transport,macromolecule metabolic process,transferase activity,intracellular transport,cellular process,response to light stimulus,establishment of localization in cell,cellular protein metabolic process,organic substance metabolic process,primary metabolic process,cellular localization,phosphate-containing compound metabolic process,phosphorus metabolic process,protein metabolic process,cellular protein modification process,protein modification process,macromolecule modification","sly03013","RNA transport"]
["TCONS_00125390","XLOC_087617","5:30205477-30208471",{"v":5e-05,"d":"5.00E-05"},0.00428946,"Novel_lncRNA","co_expression","Solyc05g015500.2","GO:0046872,GO:0043169,GO:0043167,GO:0046914,GO:0005488,GO:0003674,GO:0008270","metal ion binding,cation binding,ion binding,transition metal ion binding,binding,molecular_function,zinc ion binding","--","--"]
["TCONS_00003208","XLOC_002621","2:29207131-29208262",0.00105,0.0410637,"Novel_lncRNA","co_expression","Solyc10g050730.1","GO:0003674,GO:0009055","molecular_function,electron carrier activity","--","--"]
["TCONS_00003208","XLOC_002621","2:29207131-29208262",0.00105,0.0410637,"Novel_lncRNA","co_expression","Solyc07g056230.2","GO:0016021,GO:0031224,GO:0044425,GO:0016020,GO:0005575","integral to membrane,intrinsic to membrane,membrane part,membrane,cellular_component","--","--"]
["TCONS_00003208","XLOC_002621","2:29207131-29208262",0.00105,0.0410637,"Novel_lncRNA","co_expression","Solyc12g096260.1","GO:0003674,GO:0005515,GO:0005488","molecular_function,protein binding,binding","--","--"]
["TCONS_00003208","XLOC_002621","2:29207131-29208262",0.00105,0.0410637,"Novel_lncRNA","co_expression","Solyc04g012050.2","GO:0019222,GO:0065007,GO:0050789,GO:0080090,GO:0001071,GO:0003700,GO:0060255,GO:0031323,GO:0003674,GO:0050794,GO:0009889,GO:0010468,GO:1901362,GO:0051171,GO:0006355,GO:2001141,GO:0008152,GO:0051252,GO:0019219,GO:0031326,GO:0019438,GO:0010556,GO:2000112,GO:0018130,GO:0008150,GO:0006351,GO:0032774,GO:0005488,GO:1901576,GO:0044271,GO:0009058,GO:0071704,GO:0044238,GO:0034654,GO:0044249,GO:0003677,GO:0097159,GO:1901363,GO:0043231,GO:0043227,GO:0005634,GO:0034645,GO:0016070,GO:0009059,GO:0044237,GO:0010467,GO:1901360,GO:0005575,GO:0044424,GO:0043229,GO:0043226,GO:0044260,GO:0005623,GO:0044464,GO:0006807,GO:0046483,GO:0006725,GO:0090304,GO:0005622,GO:0034641,GO:0043170,GO:0009987,GO:0003676,GO:0006139","regulation of metabolic process,biological regulation,regulation of biological process,regulation of primary metabolic process,nucleic acid binding transcription factor activity,sequence-specific DNA binding transcription factor activity,regulation of macromolecule metabolic process,regulation of cellular metabolic process,molecular_function,regulation of cellular process,regulation of biosynthetic process,regulation of gene expression,organic cyclic compound biosynthetic process,regulation of nitrogen compound metabolic process,regulation of transcription, DNA-dependent,regulation of RNA biosynthetic process,metabolic process,regulation of RNA metabolic process,regulation of nucleobase-containing compound metabolic process,regulation of cellular biosynthetic process,aromatic compound biosynthetic process,regulation of macromolecule biosynthetic process,regulation of cellular macromolecule biosynthetic process,heterocycle biosynthetic process,biological_process,transcription, DNA-dependent,RNA biosynthetic process,binding,organic substance biosynthetic process,cellular nitrogen compound biosynthetic process,biosynthetic process,organic substance metabolic process,primary metabolic process,nucleobase-containing compound biosynthetic process,cellular biosynthetic process,DNA binding,organic cyclic compound binding,heterocyclic compound binding,intracellular membrane-bounded organelle,membrane-bounded organelle,nucleus,cellular macromolecule biosynthetic process,RNA metabolic process,macromolecule biosynthetic process,cellular metabolic process,gene expression,organic cyclic compound metabolic process,cellular_component,intracellular part,intracellular organelle,organelle,cellular macromolecule metabolic process,cell,cell part,nitrogen compound metabolic process,heterocycle metabolic process,cellular aromatic compound metabolic process,nucleic acid metabolic process,intracellular,cellular nitrogen compound metabolic process,macromolecule metabolic process,cellular process,nucleic acid binding,nucleobase-containing compound metabolic process","--","--"]
["TCONS_00003208","XLOC_002621","2:29207131-29208262",0.00105,0.0410637,"Novel_lncRNA","co_expression","Solyc02g077240.2","GO:0019842,GO:0030976,GO:1901681,GO:0046872,GO:0043169,GO:0000287,GO:0016831,GO:0016830,GO:0043167,GO:0048037,GO:0016829,GO:0005488,GO:0050662,GO:0003674,GO:0097159,GO:1901363,GO:0043168,GO:0003824,GO:0036094","vitamin binding,thiamine pyrophosphate binding,sulfur compound binding,metal ion binding,cation binding,magnesium ion binding,carboxy-lyase activity,carbon-carbon lyase activity,ion binding,cofactor binding,lyase activity,binding,coenzyme binding,molecular_function,organic cyclic compound binding,heterocyclic compound binding,anion binding,catalytic activity,small molecule binding","sly00010,sly01110,sly01100","Glycolysis / Gluconeogenesis,Biosynthesis of secondary metabolites,Metabolic pathways"]
["TCONS_00003208","XLOC_002621","2:29207131-29208262",0.00105,0.0410637,"Novel_lncRNA","co_expression","Solyc08g013810.1","GO:0003674,GO:0005515,GO:0005488","molecular_function,protein binding,binding","--","--"]
["TCONS_00150053","XLOC_104931","7:4969119-4970000",{"v":5e-05,"d":"5.00E-05"},0.00428946,"Novel_lncRNA","co_location","Solyc07g014610.2","GO:0003824,GO:0008150,GO:0003674,GO:0008152","catalytic activity,biological_process,molecular_function,metabolic process","sly00563,sly01100","Glycosylphosphatidylinositol(GPI)-anchor biosynthesis,Metabolic pathways"]
["TCONS_00150053","XLOC_104931","7:4969119-4970000",{"v":5e-05,"d":"5.00E-05"},0.00428946,"Novel_lncRNA","co_location","Solyc07g014640.2","GO:0004335,GO:0046835,GO:0006012,GO:0019200,GO:0005623,GO:0044464,GO:0005737,GO:0005575,GO:0005622,GO:0044262,GO:0003824,GO:0008150,GO:0044424,GO:0003674,GO:0044723,GO:0016740,GO:0008152,GO:0019318,GO:0005975,GO:0005996,GO:0043167,GO:0016772,GO:0016310,GO:0016773,GO:0016301,GO:0009987,GO:0005488,GO:0097159,GO:1901363,GO:0043168,GO:0044237,GO:0006796,GO:0006793,GO:0000166,GO:1901265,GO:0036094,GO:0044238,GO:0032553,GO:0035639,GO:0071704,GO:0005524,GO:0001883,GO:0032550,GO:0032555,GO:0017076,GO:0032549,GO:0001882,GO:0032559,GO:0030554","galactokinase activity,carbohydrate phosphorylation,galactose metabolic process,carbohydrate kinase activity,cell,cell part,cytoplasm,cellular_component,intracellular,cellular carbohydrate metabolic process,catalytic activity,biological_process,intracellular part,molecular_function,single-organism carbohydrate metabolic process,transferase activity,metabolic process,hexose metabolic process,carbohydrate metabolic process,monosaccharide metabolic process,ion binding,transferase activity, transferring phosphorus-containing groups,phosphorylation,phosphotransferase activity, alcohol group as acceptor,kinase activity,cellular process,binding,organic cyclic compound binding,heterocyclic compound binding,anion binding,cellular metabolic process,phosphate-containing compound metabolic process,phosphorus metabolic process,nucleotide binding,nucleoside phosphate binding,small molecule binding,primary metabolic process,ribonucleotide binding,purine ribonucleoside triphosphate binding,organic substance metabolic process,ATP binding,purine nucleoside binding,purine ribonucleoside binding,purine ribonucleotide binding,purine nucleotide binding,ribonucleoside binding,nucleoside binding,adenyl ribonucleotide binding,adenyl nucleotide binding","sly00520","Amino sugar and nucleotide sugar metabolism"]
["TCONS_00150053","XLOC_104931","7:4969119-4970000",{"v":5e-05,"d":"5.00E-05"},0.00428946,"Novel_lncRNA","co_location","Solyc07g014590.2","GO:0010368,GO:0043033,GO:0019156,GO:0055114,GO:0010021,GO:2000896,GO:0004133,GO:0043085,GO:0044093,GO:0005977,GO:0006112,GO:0044434,GO:0044435,GO:0050790,GO:0044710,GO:0065009,GO:0005623,GO:0044464,GO:0005737,GO:0005575,GO:0004553,GO:0005622,GO:0016798,GO:0044262,GO:0003824,GO:0009507,GO:0006091,GO:0044444,GO:0009536,GO:0043229,GO:0043226,GO:0006073,GO:0044042,GO:0000023,GO:0015980,GO:0043231,GO:0043227,GO:0008150,GO:0044424,GO:0005984,GO:0044264,GO:0009311,GO:0043169,GO:0003674,GO:0044446,GO:0044422,GO:0005976,GO:0044723,GO:0043234,GO:0008152,GO:0016787,GO:0032991,GO:0005975,GO:1901135,GO:1901137,GO:0043167,GO:0009987,GO:0005488,GO:0050789,GO:0065007,GO:0009059,GO:0044237,GO:0019222,GO:0044238,GO:0009058,GO:1901576,GO:0044260,GO:0071704,GO:0043170","chloroplast isoamylase complex,isoamylase complex,isoamylase activity,oxidation-reduction process,amylopectin biosynthetic process,amylopectin metabolic process,glycogen debranching enzyme activity,positive regulation of catalytic activity,positive regulation of molecular function,glycogen metabolic process,energy reserve metabolic process,chloroplast part,plastid part,regulation of catalytic activity,single-organism metabolic process,regulation of molecular function,cell,cell part,cytoplasm,cellular_component,hydrolase activity, hydrolyzing O-glycosyl compounds,intracellular,hydrolase activity, acting on glycosyl bonds,cellular carbohydrate metabolic process,catalytic activity,chloroplast,generation of precursor metabolites and energy,cytoplasmic part,plastid,intracellular organelle,organelle,cellular glucan metabolic process,glucan metabolic process,maltose metabolic process,energy derivation by oxidation of organic compounds,intracellular membrane-bounded organelle,membrane-bounded organelle,biological_process,intracellular part,disaccharide metabolic process,cellular polysaccharide metabolic process,oligosaccharide metabolic process,cation binding,molecular_function,intracellular organelle part,organelle part,polysaccharide metabolic process,single-organism carbohydrate metabolic process,protein complex,metabolic process,hydrolase activity,macromolecular complex,carbohydrate metabolic process,carbohydrate derivative metabolic process,carbohydrate derivative biosynthetic process,ion binding,cellular process,binding,regulation of biological process,biological regulation,macromolecule biosynthetic process,cellular metabolic process,regulation of metabolic process,primary metabolic process,biosynthetic process,organic substance biosynthetic process,cellular macromolecule metabolic process,organic substance metabolic process,macromolecule metabolic process","--","--"]
["TCONS_00150053","XLOC_104931","7:4969119-4970000",{"v":5e-05,"d":"5.00E-05"},0.00428946,"Novel_lncRNA","co_location","Solyc07g014650.2","GO:0007021,GO:0072668,GO:0009558,GO:0007349,GO:0009960,GO:0048646,GO:0005623,GO:0044464,GO:0009790,GO:0005575,GO:0005622,GO:0044767,GO:0043623,GO:0009561,GO:0050896,GO:0008150,GO:0044699,GO:0006461,GO:0070271,GO:0009653,GO:0007264,GO:0009553,GO:0034622,GO:0071822,GO:0071840,GO:0048856,GO:0065003,GO:0003674,GO:0016043,GO:0009793,GO:0032502,GO:0043933,GO:0048229,GO:0035556,GO:0044085,GO:0044763,GO:0048316,GO:0022607,GO:0010154,GO:0005525,GO:0019001,GO:0032561,GO:0003006,GO:0032501,GO:0009888,GO:0022414,GO:0007275,GO:0000003,GO:0043167,GO:0051716,GO:0044707,GO:0048608,GO:0061458,GO:0048513,GO:0009987,GO:0005488,GO:0097159,GO:1901363,GO:0050789,GO:0009791,GO:0007165,GO:0044700,GO:0023052,GO:0065007,GO:0043168,GO:0007154,GO:0048731,GO:0000166,GO:1901265,GO:0036094,GO:0032553,GO:0035639,GO:0001883,GO:0032550,GO:0032555,GO:0017076,GO:0032549,GO:0001882,GO:0050794","tubulin complex assembly,tubulin complex biogenesis,embryo sac cellularization,cellularization,endosperm development,anatomical structure formation involved in morphogenesis,cell,cell part,embryo development,cellular_component,intracellular,single-organism developmental process,cellular protein complex assembly,megagametogenesis,response to stimulus,biological_process,single-organism process,protein complex assembly,protein complex biogenesis,anatomical structure morphogenesis,small GTPase mediated signal transduction,embryo sac development,cellular macromolecular complex assembly,protein complex subunit organization,cellular component organization or biogenesis,anatomical structure development,macromolecular complex assembly,molecular_function,cellular component organization,embryo development ending in seed dormancy,developmental process,macromolecular complex subunit organization,gametophyte development,intracellular signal transduction,cellular component biogenesis,single-organism cellular process,seed development,cellular component assembly,fruit development,GTP binding,guanyl nucleotide binding,guanyl ribonucleotide binding,developmental process involved in reproduction,multicellular organismal process,tissue development,reproductive process,multicellular organismal development,reproduction,ion binding,cellular response to stimulus,single-multicellular organism process,reproductive structure development,reproductive system development,organ development,cellular process,binding,organic cyclic compound binding,heterocyclic compound binding,regulation of biological process,post-embryonic development,signal transduction,single organism signaling,signaling,biological regulation,anion binding,cell communication,system development,nucleotide binding,nucleoside phosphate binding,small molecule binding,ribonucleotide binding,purine ribonucleoside triphosphate binding,purine nucleoside binding,purine ribonucleoside binding,purine ribonucleotide binding,purine nucleotide binding,ribonucleoside binding,nucleoside binding,regulation of cellular process","--","--"]
["TCONS_00030512","XLOC_021399","8:63365396-63367985",{"v":5e-05,"d":"5.00E-05"},0.00428946,"Novel_lncRNA","co_location","Solyc08g079990.1","GO:0004252,GO:0008236,GO:0017171,GO:0004175,GO:0006508,GO:0070011,GO:0008233,GO:0043170,GO:0008150,GO:0071704,GO:0003824,GO:0044238,GO:0008152,GO:0019538,GO:0016787,GO:0003674","serine-type endopeptidase activity,serine-type peptidase activity,serine hydrolase activity,endopeptidase activity,proteolysis,peptidase activity, acting on L-amino acid peptides,peptidase activity,macromolecule metabolic process,biological_process,organic substance metabolic process,catalytic activity,primary metabolic process,metabolic process,protein metabolic process,hydrolase activity,molecular_function","--","--"]
["TCONS_00030512","XLOC_021399","8:63365396-63367985",{"v":5e-05,"d":"5.00E-05"},0.00428946,"Novel_lncRNA","co_location","Solyc08g079930.1","GO:0004252,GO:0008236,GO:0017171,GO:0004175,GO:0006508,GO:0070011,GO:0008233,GO:0043170,GO:0008150,GO:0071704,GO:0003824,GO:0044238,GO:0008152,GO:0019538,GO:0016787,GO:0003674","serine-type endopeptidase activity,serine-type peptidase activity,serine hydrolase activity,endopeptidase activity,proteolysis,peptidase activity, acting on L-amino acid peptides,peptidase activity,macromolecule metabolic process,biological_process,organic substance metabolic process,catalytic activity,primary metabolic process,metabolic process,protein metabolic process,hydrolase activity,molecular_function","--","--"]
["TCONS_00030512","XLOC_021399","8:63365396-63367985",{"v":5e-05,"d":"5.00E-05"},0.00428946,"Novel_lncRNA","co_location","Solyc08g079870.1","GO:0003824,GO:0008152,GO:0008150,GO:0016787,GO:0004175,GO:0003674,GO:0004252,GO:0071704,GO:0008236,GO:0017171,GO:0044238,GO:0070011,GO:0008233,GO:0006508,GO:0043170,GO:0019538","catalytic activity,metabolic process,biological_process,hydrolase activity,endopeptidase activity,molecular_function,serine-type endopeptidase activity,organic substance metabolic process,serine-type peptidase activity,serine hydrolase activity,primary metabolic process,peptidase activity, acting on L-amino acid peptides,peptidase activity,proteolysis,macromolecule metabolic process,protein metabolic process","--","--"]
["TCONS_00030512","XLOC_021399","8:63365396-63367985",{"v":5e-05,"d":"5.00E-05"},0.00428946,"Novel_lncRNA","co_location","Solyc08g080100.2","GO:0050789,GO:0043170,GO:0065007,GO:0008150,GO:0050794,GO:0019222,GO:0019219,GO:0071704,GO:0044238,GO:0051171,GO:0006355,GO:2001141,GO:0051252,GO:0010556,GO:2000112,GO:0008152,GO:0005634,GO:0031326,GO:0009889,GO:0010468,GO:0060255,GO:0080090,GO:0031323,GO:0006139,GO:0090304,GO:0006351,GO:0032774,GO:0046983,GO:0046483,GO:0016070,GO:0018130,GO:1901360,GO:0044260,GO:0005623,GO:0044464,GO:0006725,GO:0034654,GO:0034641,GO:0003676,GO:0010467,GO:1901362,GO:0009987,GO:0003677,GO:0044271,GO:0043231,GO:0043227,GO:0006807,GO:0044237,GO:0009059,GO:0009058,GO:0019438,GO:0034645,GO:0097159,GO:1901363,GO:0003674,GO:0043229,GO:0043226,GO:0044249,GO:1901576,GO:0005488,GO:0001071,GO:0003700,GO:0044424,GO:0005622,GO:0005575,GO:0005515","regulation of biological process,macromolecule metabolic process,biological regulation,biological_process,regulation of cellular process,regulation of metabolic process,regulation of nucleobase-containing compound metabolic process,organic substance metabolic process,primary metabolic process,regulation of nitrogen compound metabolic process,regulation of transcription, DNA-dependent,regulation of RNA biosynthetic process,regulation of RNA metabolic process,regulation of macromolecule biosynthetic process,regulation of cellular macromolecule biosynthetic process,metabolic process,nucleus,regulation of cellular biosynthetic process,regulation of biosynthetic process,regulation of gene expression,regulation of macromolecule metabolic process,regulation of primary metabolic process,regulation of cellular metabolic process,nucleobase-containing compound metabolic process,nucleic acid metabolic process,transcription, DNA-dependent,RNA biosynthetic process,protein dimerization activity,heterocycle metabolic process,RNA metabolic process,heterocycle biosynthetic process,organic cyclic compound metabolic process,cellular macromolecule metabolic process,cell,cell part,cellular aromatic compound metabolic process,nucleobase-containing compound biosynthetic process,cellular nitrogen compound metabolic process,nucleic acid binding,gene expression,organic cyclic compound biosynthetic process,cellular process,DNA binding,cellular nitrogen compound biosynthetic process,intracellular membrane-bounded organelle,membrane-bounded organelle,nitrogen compound metabolic process,cellular metabolic process,macromolecule biosynthetic process,biosynthetic process,aromatic compound biosynthetic process,cellular macromolecule biosynthetic process,organic cyclic compound binding,heterocyclic compound binding,molecular_function,intracellular organelle,organelle,cellular biosynthetic process,organic substance biosynthetic process,binding,nucleic acid binding transcription factor activity,sequence-specific DNA binding transcription factor activity,intracellular part,intracellular,cellular_component,protein binding","--","--"]
["TCONS_00089053","XLOC_062157","3:21563483-21571331",0.0003,0.0170986,"Novel_lncRNA","co_expression","Solyc12g009930.1","GO:0003674,GO:0008150,GO:0008152,GO:0003824,GO:0016758,GO:0016740,GO:0016757","molecular_function,biological_process,metabolic process,catalytic activity,transferase activity, transferring hexosyl groups,transferase activity,transferase activity, transferring glycosyl groups","sly00908","Zeatin biosynthesis"]
["TCONS_00089053","XLOC_062157","3:21563483-21571331",0.0003,0.0170986,"Novel_lncRNA","co_expression","Solyc01g086920.2","GO:0005488,GO:0003674,GO:0005515","binding,molecular_function,protein binding","--","--"]
["TCONS_00089053","XLOC_062157","3:21563483-21571331",0.0003,0.0170986,"Novel_lncRNA","co_expression","Solyc04g063210.2","GO:0008171,GO:0003674,GO:0008168,GO:0016741,GO:0003824,GO:0016740","O-methyltransferase activity,molecular_function,methyltransferase activity,transferase activity, transferring one-carbon groups,catalytic activity,transferase activity","sly01110,sly00360,sly00945,sly00941,sly00940,sly01100","Biosynthesis of secondary metabolites,Phenylalanine metabolism,Stilbenoid, diarylheptanoid and gingerol biosynthesis,Flavonoid biosynthesis,Phenylpropanoid biosynthesis,Metabolic pathways"]
["TCONS_00089053","XLOC_062157","3:21563483-21571331",0.0003,0.0170986,"Novel_lncRNA","co_expression","Solyc01g105880.2","GO:0046872,GO:0043169,GO:0000287,GO:0043167,GO:0016829,GO:0005488,GO:0010333,GO:0016838,GO:0003674,GO:0016835,GO:0008150,GO:0008152,GO:0003824","metal ion binding,cation binding,magnesium ion binding,ion binding,lyase activity,binding,terpene synthase activity,carbon-oxygen lyase activity, acting on phosphates,molecular_function,carbon-oxygen lyase activity,biological_process,metabolic process,catalytic activity","--","--"]
["TCONS_00089053","XLOC_062157","3:21563483-21571331",0.0003,0.0170986,"Novel_lncRNA","co_expression","Solyc11g028250.1","GO:0046872,GO:0043169,GO:0043167,GO:0046914,GO:0003676,GO:0005488,GO:0003674,GO:0008270,GO:0097159,GO:1901363","metal ion binding,cation binding,ion binding,transition metal ion binding,nucleic acid binding,binding,molecular_function,zinc ion binding,organic cyclic compound binding,heterocyclic compound binding","--","--"]
["TCONS_00019139","XLOC_014037","1:70737429-70739549",0.00025,0.0149406,"Novel_lncRNA","co_location","Solyc01g060420.2","GO:0043167,GO:0097159,GO:1901363,GO:0005488,GO:0003676,GO:0003674,GO:0043169,GO:0046872","ion binding,organic cyclic compound binding,heterocyclic compound binding,binding,nucleic acid binding,molecular_function,cation binding,metal ion binding","--","--"]
["TCONS_00019139","XLOC_014037","1:70737429-70739549",0.00025,0.0149406,"Novel_lncRNA","co_location","Solyc01g060380.1","--","--","sly04120","Ubiquitin mediated proteolysis"]
["TCONS_00019139","XLOC_014037","1:70737429-70739549",0.00025,0.0149406,"Novel_lncRNA","co_location","Solyc01g060400.1","--","--","sly03060,sly04141","Protein export,Protein processing in endoplasmic reticulum"]
["TCONS_00019139","XLOC_014037","1:70737429-70739549",0.00025,0.0149406,"Novel_lncRNA","co_location","Solyc01g060390.1","--","--","sly04120","Ubiquitin mediated proteolysis"]
["TCONS_00051510","XLOC_036966","11:681237-683973",0.00015,0.010236,"Novel_lncRNA","co_location","Solyc11g005970.1","GO:0003674,GO:0005488,GO:0043167,GO:0005515,GO:0046914,GO:0008270,GO:0043169,GO:0046872","molecular_function,binding,ion binding,protein binding,transition metal ion binding,zinc ion binding,cation binding,metal ion binding","--","--"]
["TCONS_00051510","XLOC_036966","11:681237-683973",0.00015,0.010236,"Novel_lncRNA","co_location","Solyc11g005940.1","GO:0003674,GO:0005488,GO:0005515","molecular_function,binding,protein binding","--","--"]
["TCONS_00051510","XLOC_036966","11:681237-683973",0.00015,0.010236,"Novel_lncRNA","co_location","Solyc11g005740.1","GO:0003674,GO:0005488,GO:0043167,GO:0043169,GO:0046872","molecular_function,binding,ion binding,cation binding,metal ion binding","--","--"]
["TCONS_00051510","XLOC_036966","11:681237-683973",0.00015,0.010236,"Novel_lncRNA","co_location","Solyc11g005820.1","GO:0050789,GO:0065007,GO:0008150,GO:0019222,GO:0003824,GO:0008152,GO:0052689,GO:0050790,GO:0016787,GO:0065009,GO:0004857,GO:0030599,GO:0043086,GO:0044092,GO:0030234,GO:0003674,GO:0016788","regulation of biological process,biological regulation,biological_process,regulation of metabolic process,catalytic activity,metabolic process,carboxylic ester hydrolase activity,regulation of catalytic activity,hydrolase activity,regulation of molecular function,enzyme inhibitor activity,pectinesterase activity,negative regulation of catalytic activity,negative regulation of molecular function,enzyme regulator activity,molecular_function,hydrolase activity, acting on ester bonds","--","--"]
["TCONS_00051510","XLOC_036966","11:681237-683973",0.00015,0.010236,"Novel_lncRNA","co_location","Solyc11g005830.1","GO:0030170,GO:0048037,GO:0003824,GO:0043168,GO:0003674,GO:0005488,GO:0043167","pyridoxal phosphate binding,cofactor binding,catalytic activity,anion binding,molecular_function,binding,ion binding","--","--"]
["TCONS_00099820","XLOC_069665","2:39146180-39148982",{"v":5e-05,"d":"5.00E-05"},0.00428946,"Novel_lncRNA","co_location","Solyc02g069310.2","GO:0005515,GO:0005488,GO:0003674","protein binding,binding,molecular_function","sly04075","Plant hormone signal transduction"]
["TCONS_00099820","XLOC_069665","2:39146180-39148982",{"v":5e-05,"d":"5.00E-05"},0.00428946,"Novel_lncRNA","co_location","Solyc02g069080.2","GO:0010050,GO:0009799,GO:0009855,GO:0009933,GO:0048532,GO:0016458,GO:0010014,GO:0007275,GO:0009616,GO:0052018,GO:0052249,GO:0048856,GO:0044003,GO:0051817,GO:0002252,GO:0035821,GO:0007389,GO:0009791,GO:0044700,GO:0051701,GO:0023052,GO:0009653,GO:0032502,GO:0050789,GO:0048513,GO:0044707,GO:0044403,GO:0065007,GO:0032501,GO:0048731,GO:0044419,GO:0051607,GO:0010629,GO:0044699,GO:0009615,GO:0009888,GO:0031047,GO:0044763,GO:0019222,GO:0044767,GO:0048519,GO:0051716,GO:0007154,GO:0010605,GO:0007267,GO:0071407,GO:0009892,GO:0040029,GO:0048507,GO:0006396,GO:0006955,GO:0045087,GO:0090304,GO:0060255,GO:0010267,GO:0010468,GO:0006139,GO:0050896,GO:0002376,GO:0051707,GO:0065008,GO:0014070,GO:0035196,GO:0035195,GO:0016070,GO:0009607,GO:0030422,GO:0034641,GO:0031050,GO:0043331,GO:0070918,GO:0071359,GO:0006950,GO:1901699,GO:0046483,GO:0008152,GO:0010467,GO:0006725,GO:0070887,GO:0016246,GO:0051704,GO:0009987,GO:0006807,GO:0035194,GO:0016441,GO:0006952,GO:0008150,GO:1901360,GO:0071310,GO:0010073,GO:0010608,GO:0044237,GO:0010033,GO:1901698,GO:0042221,GO:0043170,GO:0044260,GO:0044238,GO:0071704","vegetative phase change,specification of symmetry,determination of bilateral symmetry,meristem structural organization,anatomical structure arrangement,gene silencing,meristem initiation,multicellular organismal development,virus induced gene silencing,modulation by symbiont of RNA levels in host,modulation of RNA levels in other organism involved in symbiotic interaction,anatomical structure development,modification by symbiont of host morphology or physiology,modification of morphology or physiology of other organism involved in symbiotic interaction,immune effector process,modification of morphology or physiology of other organism,pattern specification process,post-embryonic development,single organism signaling,interaction with host,signaling,anatomical structure morphogenesis,developmental process,regulation of biological process,organ development,single-multicellular organism process,symbiosis, encompassing mutualism through parasitism,biological regulation,multicellular organismal process,system development,interspecies interaction between organisms,defense response to virus,negative regulation of gene expression,single-organism process,response to virus,tissue development,gene silencing by RNA,single-organism cellular process,regulation of metabolic process,single-organism developmental process,negative regulation of biological process,cellular response to stimulus,cell communication,negative regulation of macromolecule metabolic process,cell-cell signaling,cellular response to organic cyclic compound,negative regulation of metabolic process,regulation of gene expression, epigenetic,meristem development,RNA processing,immune response,innate immune response,nucleic acid metabolic process,regulation of macromolecule metabolic process,production of ta-siRNAs involved in RNA interference,regulation of gene expression,nucleobase-containing compound metabolic process,response to stimulus,immune system process,response to other organism,regulation of biological quality,response to organic cyclic compound,production of miRNAs involved in gene silencing by miRNA,gene silencing by miRNA,RNA metabolic process,response to biotic stimulus,production of siRNA involved in RNA interference,cellular nitrogen compound metabolic process,dsRNA fragmentation,response to dsRNA,production of small RNA involved in gene silencing by RNA,cellular response to dsRNA,response to stress,cellular response to nitrogen compound,heterocycle metabolic process,metabolic process,gene expression,cellular aromatic compound metabolic process,cellular response to chemical stimulus,RNA interference,multi-organism process,cellular process,nitrogen compound metabolic process,posttranscriptional gene silencing by RNA,posttranscriptional gene silencing,defense response,biological_process,organic cyclic compound metabolic process,cellular response to organic substance,meristem maintenance,posttranscriptional regulation of gene expression,cellular metabolic process,response to organic substance,response to nitrogen compound,response to chemical stimulus,macromolecule metabolic process,cellular macromolecule metabolic process,primary metabolic process,organic substance metabolic process","--","--"]
["TCONS_00099820","XLOC_069665","2:39146180-39148982",{"v":5e-05,"d":"5.00E-05"},0.00428946,"Novel_lncRNA","co_location","Solyc02g069170.1","GO:0005515,GO:0046983,GO:0005488,GO:0046982,GO:0003674","protein binding,protein dimerization activity,binding,protein heterodimerization activity,molecular_function","sly03022","Basal transcription factors"]
["TCONS_00099820","XLOC_069665","2:39146180-39148982",{"v":5e-05,"d":"5.00E-05"},0.00428946,"Novel_lncRNA","co_location","Solyc02g069280.2","GO:0005515,GO:0016458,GO:0050789,GO:0065007,GO:0005488,GO:0010629,GO:0044699,GO:0031047,GO:0044763,GO:0019222,GO:0048519,GO:0010605,GO:0009892,GO:0060255,GO:0010468,GO:0003676,GO:0097159,GO:1901363,GO:0008152,GO:0010467,GO:0009987,GO:0008150,GO:0003674,GO:0043170,GO:0071704","protein binding,gene silencing,regulation of biological process,biological regulation,binding,negative regulation of gene expression,single-organism process,gene silencing by RNA,single-organism cellular process,regulation of metabolic process,negative regulation of biological process,negative regulation of macromolecule metabolic process,negative regulation of metabolic process,regulation of macromolecule metabolic process,regulation of gene expression,nucleic acid binding,organic cyclic compound binding,heterocyclic compound binding,metabolic process,gene expression,cellular process,biological_process,molecular_function,macromolecule metabolic process,organic substance metabolic process","--","--"]
["TCONS_00099820","XLOC_069665","2:39146180-39148982",{"v":5e-05,"d":"5.00E-05"},0.00428946,"Novel_lncRNA","co_location","Solyc02g069320.1","GO:0050789,GO:0065007,GO:0005488,GO:0019222,GO:0003677,GO:0050794,GO:0090304,GO:0060255,GO:0010468,GO:0003676,GO:0006139,GO:0031323,GO:0005575,GO:0003690,GO:0019219,GO:0016070,GO:0031326,GO:0051171,GO:0034641,GO:0097159,GO:1901363,GO:0009889,GO:0010556,GO:2000112,GO:0006355,GO:2001141,GO:0051252,GO:0046483,GO:0006351,GO:0032774,GO:0008152,GO:0010467,GO:0080090,GO:0006725,GO:0043566,GO:0009987,GO:0006807,GO:0034654,GO:0044271,GO:0018130,GO:0008150,GO:1901360,GO:0019438,GO:0009059,GO:0003674,GO:0044249,GO:0034645,GO:0009058,GO:0005737,GO:1901576,GO:1901362,GO:0005623,GO:0044464,GO:0005739,GO:0044237,GO:0044444,GO:0043170,GO:0044260,GO:0044238,GO:0071704,GO:0005622,GO:0044424,GO:0043231,GO:0043227,GO:0043229,GO:0043226","regulation of biological process,biological regulation,binding,regulation of metabolic process,DNA binding,regulation of cellular process,nucleic acid metabolic process,regulation of macromolecule metabolic process,regulation of gene expression,nucleic acid binding,nucleobase-containing compound metabolic process,regulation of cellular metabolic process,cellular_component,double-stranded DNA binding,regulation of nucleobase-containing compound metabolic process,RNA metabolic process,regulation of cellular biosynthetic process,regulation of nitrogen compound metabolic process,cellular nitrogen compound metabolic process,organic cyclic compound binding,heterocyclic compound binding,regulation of biosynthetic process,regulation of macromolecule biosynthetic process,regulation of cellular macromolecule biosynthetic process,regulation of transcription, DNA-dependent,regulation of RNA biosynthetic process,regulation of RNA metabolic process,heterocycle metabolic process,transcription, DNA-dependent,RNA biosynthetic process,metabolic process,gene expression,regulation of primary metabolic process,cellular aromatic compound metabolic process,structure-specific DNA binding,cellular process,nitrogen compound metabolic process,nucleobase-containing compound biosynthetic process,cellular nitrogen compound biosynthetic process,heterocycle biosynthetic process,biological_process,organic cyclic compound metabolic process,aromatic compound biosynthetic process,macromolecule biosynthetic process,molecular_function,cellular biosynthetic process,cellular macromolecule biosynthetic process,biosynthetic process,cytoplasm,organic substance biosynthetic process,organic cyclic compound biosynthetic process,cell,cell part,mitochondrion,cellular metabolic process,cytoplasmic part,macromolecule metabolic process,cellular macromolecule metabolic process,primary metabolic process,organic substance metabolic process,intracellular,intracellular part,intracellular membrane-bounded organelle,membrane-bounded organelle,intracellular organelle,organelle","--","--"]

{"sheet":"fig. 7b","index":1,"n_rows":17,"n_cols":14,"rows_kept":17,"flags":["formulas_cached_only"]}
["Table S10. Data of lncRNA-mRNA network"]
["transcript_id","gene_id","gene_location","pvalue","qvalue","Status","Target_prediction_method","Target_gene_id","Target_GO_id",null,"Target_GO_description",null,"Target_KO_id","Target_KO_description"]
["TCONS_00051510","XLOC_036966","11:681237-683973",0.00015,0.010236,"Novel_lncRNA","co_expression","Solyc09g092670.3","GO:0016705,GO:0016491,GO:0055114,GO:0044710,GO:0005506,GO:0046872,GO:0043169,GO:0003824,GO:0043167,GO:0020037,GO:0046914,GO:0046906,GO:0003674,GO:0004497,GO:0008152,GO:0008150,GO:0005488,GO:0097159,GO:1901363","oxidation-reduction related","oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen,oxidoreductase activity,oxidation-reduction process,single-organism metabolic process,iron ion binding,metal ion binding,cation binding,catalytic activity,ion binding,heme binding,transition metal ion binding,tetrapyrrole binding,molecular_function,monooxygenase activity,metabolic process,biological_process,binding,organic cyclic compound binding,heterocyclic compound binding",null,"--","--"]
["TCONS_00051510","XLOC_036966","11:681237-683973",0.00015,0.010236,"Novel_lncRNA","co_expression","Solyc03g123550.2","GO:0050896,GO:0009733,GO:0008150,GO:0010033,GO:0042221,GO:0009725,GO:0009719","Hormone related","response to stimulus,response to auxin stimulus,biological_process,response to organic substance,response to chemical stimulus,response to hormone stimulus,response to endogenous stimulus",null,"sly04075","Plant hormone signal transduction"]
["TCONS_00051510","XLOC_036966","11:681237-683973",0.00015,0.010236,"Novel_lncRNA","co_location","Solyc11g005750.2","GO:0030312,GO:0005618,GO:0071944,GO:0071555,GO:0045229,GO:0071554,GO:0043170,GO:0010393,GO:0045488,GO:0005976,GO:0008150,GO:0071704,GO:0003824,GO:0044238,GO:0016052,GO:0008152,GO:0052689,GO:0045490,GO:0000272,GO:0016787,GO:0004857,GO:0005975,GO:0030599,GO:0042545,GO:0005623,GO:0044464,GO:0009057,GO:0009987,GO:0045330,GO:0071840,GO:0030234,GO:0016043,GO:0044699,GO:0003674,GO:1901575,GO:0044763,GO:0009056,GO:0016788,GO:0005575","Cell wall component related","external encapsulating structure,cell wall,cell periphery,cell wall organization,external encapsulating structure organization,cell wall organization or biogenesis,macromolecule metabolic process,galacturonan metabolic process,pectin metabolic process,polysaccharide metabolic process,biological_process,organic substance metabolic process,catalytic activity,primary metabolic process,carbohydrate catabolic process,metabolic process,carboxylic ester hydrolase activity,pectin catabolic process,polysaccharide catabolic process,hydrolase activity,enzyme inhibitor activity,carbohydrate metabolic process,pectinesterase activity,cell wall modification,cell,cell part,macromolecule catabolic process,cellular process,aspartyl esterase activity,cellular component organization or biogenesis,enzyme regulator activity,cellular component organization,single-organism process,molecular_function,organic substance catabolic process,single-organism cellular process,catabolic process,hydrolase activity, acting on ester bonds,cellular_component",null,"--","--"]
["TCONS_00051510","XLOC_036966","11:681237-683973",0.00015,0.010236,"Novel_lncRNA","co_location","Solyc11g005760.2","GO:0071669,GO:0071554,GO:0043170,GO:0010383,GO:0080116,GO:0005976,GO:0044262,GO:0008150,GO:0010410,GO:0044264,GO:0044036,GO:0071704,GO:0003824,GO:0010417,GO:0044238,GO:0009834,GO:0008152,GO:0042546,GO:0009832,GO:0005975,GO:0044085,GO:0010413,GO:0015020,GO:0044723,GO:0044260,GO:0005623,GO:0044464,GO:0008194,GO:0045492,GO:0009987,GO:0045491,GO:0070592,GO:0044038,GO:0070589,GO:0043231,GO:0043227,GO:0044237,GO:0009059,GO:0071840,GO:0009058,GO:0016740,GO:0034645,GO:0044699,GO:0003674,GO:0043229,GO:0043226,GO:0044763,GO:0044249,GO:1901576,GO:0000271,GO:0044424,GO:0016758,GO:0016051,GO:0033692,GO:0016757,GO:0005622,GO:0034637,GO:0005575,GO:0005794,GO:0005737,GO:0044444","Cell wall component related","plant-type cell wall organization or biogenesis,cell wall organization or biogenesis,macromolecule metabolic process,cell wall polysaccharide metabolic process,glucuronoxylan glucuronosyltransferase activity,polysaccharide metabolic process,cellular carbohydrate metabolic process,biological_process,hemicellulose metabolic process,cellular polysaccharide metabolic process,cell wall macromolecule metabolic process,organic substance metabolic process,catalytic activity,glucuronoxylan biosynthetic process,primary metabolic process,secondary cell wall biogenesis,metabolic process,cell wall biogenesis,plant-type cell wall biogenesis,carbohydrate metabolic process,cellular component biogenesis,glucuronoxylan metabolic process,glucuronosyltransferase activity,single-organism carbohydrate metabolic process,cellular macromolecule metabolic process,cell,cell part,UDP-glycosyltransferase activity,xylan biosynthetic process,cellular process,xylan metabolic process,cell wall polysaccharide biosynthetic process,cell wall macromolecule biosynthetic process,cellular component macromolecule biosynthetic process,intracellular membrane-bounded organelle,membrane-bounded organelle,cellular metabolic process,macromolecule biosynthetic process,cellular component organization or biogenesis,biosynthetic process,transferase activity,cellular macromolecule biosynthetic process,single-organism process,molecular_function,intracellular organelle,organelle,single-organism cellular process,cellular biosynthetic process,organic substance biosynthetic process,polysaccharide biosynthetic process,intracellular part,transferase activity, transferring hexosyl groups,carbohydrate biosynthetic process,cellular polysaccharide biosynthetic process,transferase activity, transferring glycosyl groups,intracellular,cellular carbohydrate biosynthetic process,cellular_component,Golgi apparatus,cytoplasm,cytoplasmic part",null,"--","--"]
["TCONS_00150053","XLOC_104931","7:4969119-4970000",{"v":5e-05,"d":"5.00E-05"},0.00428946,"Novel_lncRNA","co_expression","Solyc06g060070.3","GO:0051213,GO:0016706,GO:0016705,GO:0016491,GO:0044711,GO:0006066,GO:0055114,GO:0046165,GO:1901615,GO:0044710,GO:1901617,GO:0046872,GO:0043169,GO:0044283,GO:0003824,GO:0015698,GO:0010106,GO:0006694,GO:0008202,GO:0006950,GO:0007154,GO:0043167,GO:0006826,GO:0010167,GO:0042446,GO:0016129,GO:0016132,GO:0016128,GO:0016131,GO:0015706,GO:0010817,GO:0065007,GO:0033554,GO:0051716,GO:0006820,GO:0042445,GO:0065008,GO:0050896,GO:1901698,GO:0003674,GO:0042221,GO:0009267,GO:0042594,GO:1901362,GO:0008610,GO:0031669,GO:0031667,GO:0030001,GO:0008152,GO:0000041,GO:0006629,GO:0009605,GO:0031668,GO:0071496,GO:0009991,GO:0006812,GO:0044699,GO:0008150,GO:0006811,GO:1901700,GO:0044763,GO:0005488,GO:1901576,GO:0044281,GO:0009058,GO:0071704,GO:0071705,GO:0044238,GO:0010035,GO:1901360,GO:0044765,GO:0006810,GO:0051234,GO:0009987,GO:0051179","oxidation-reduction related","dioxygenase activity,oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors,oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen,oxidoreductase activity,single-organism biosynthetic process,alcohol metabolic process,oxidation-reduction process,alcohol biosynthetic process,organic hydroxy compound metabolic process,single-organism metabolic process,organic hydroxy compound biosynthetic process,metal ion binding,cation binding,small molecule biosynthetic process,catalytic activity,inorganic anion transport,cellular response to iron ion starvation,steroid biosynthetic process,steroid metabolic process,response to stress,cell communication,ion binding,iron ion transport,response to nitrate,hormone biosynthetic process,phytosteroid biosynthetic process,brassinosteroid biosynthetic process,phytosteroid metabolic process,brassinosteroid metabolic process,nitrate transport,regulation of hormone levels,biological regulation,cellular response to stress,cellular response to stimulus,anion transport,hormone metabolic process,regulation of biological quality,response to stimulus,response to nitrogen compound,molecular_function,response to chemical stimulus,cellular response to starvation,response to starvation,organic cyclic compound biosynthetic process,lipid biosynthetic process,cellular response to nutrient levels,response to nutrient levels,metal ion transport,metabolic process,transition metal ion transport,lipid metabolic process,response to external stimulus,cellular response to extracellular stimulus,cellular response to external stimulus,response to extracellular stimulus,cation transport,single-organism process,biological_process,ion transport,response to oxygen-containing compound,single-organism cellular process,binding,organic substance biosynthetic process,small molecule metabolic process,biosynthetic process,organic substance metabolic process,nitrogen compound transport,primary metabolic process,response to inorganic substance,organic cyclic compound metabolic process,single-organism transport,transport,establishment of localization,cellular process,localization",null,"sly00270,sly01110,sly01100","Cysteine and methionine metabolism,Biosynthesis of secondary metabolites,Metabolic pathways"]
["TCONS_00150053","XLOC_104931","7:4969119-4970000",{"v":5e-05,"d":"5.00E-05"},0.00428946,"Novel_lncRNA","co_location","Solyc07g014670.3","GO:0055114,GO:0020037,GO:0044710,GO:0046906,GO:0016491,GO:0005506,GO:0003824,GO:0004497,GO:0008150,GO:0043169,GO:0003674,GO:0046914,GO:0046872,GO:0016705,GO:0008152,GO:0043167,GO:0005488,GO:0097159,GO:1901363","oxidation-reduction related","oxidation-reduction process,heme binding,single-organism metabolic process,tetrapyrrole binding,oxidoreductase activity,iron ion binding,catalytic activity,monooxygenase activity,biological_process,cation binding,molecular_function,transition metal ion binding,metal ion binding,oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen,metabolic process,ion binding,binding,organic cyclic compound binding,heterocyclic compound binding",null,"--","--"]
["TCONS_00150053","XLOC_104931","7:4969119-4970000",{"v":5e-05,"d":"5.00E-05"},0.00428946,"Novel_lncRNA","co_expression","Solyc05g055590.2","GO:0016491,GO:0055114,GO:0003676,GO:0005488,GO:0044710,GO:0003674,GO:0003677,GO:0008150,GO:0097159,GO:1901363,GO:0008152,GO:0003824,GO:0005515","oxidation-reduction related","oxidoreductase activity,oxidation-reduction process,nucleic acid binding,binding,single-organism metabolic process,molecular_function,DNA binding,biological_process,organic cyclic compound binding,heterocyclic compound binding,metabolic process,catalytic activity,protein binding",null,"--","--"]
["TCONS_00150053","XLOC_104931","7:4969119-4970000",{"v":5e-05,"d":"5.00E-05"},0.00428946,"Novel_lncRNA","co_expression","Solyc01g108630.3","GO:0016491,GO:0055114,GO:0044710,GO:0003824,GO:0051536,GO:0051540,GO:0020037,GO:0046906,GO:0003674,GO:0008152,GO:0008150,GO:0005488,GO:0097159,GO:1901363","oxidation-reduction related","oxidoreductase activity,oxidation-reduction process,single-organism metabolic process,catalytic activity,iron-sulfur cluster binding,metal cluster binding,heme binding,tetrapyrrole binding,molecular_function,metabolic process,biological_process,binding,organic cyclic compound binding,heterocyclic compound binding",null,"sly00910","Nitrogen metabolism"]
["TCONS_00150053","XLOC_104931","7:4969119-4970000",{"v":5e-05,"d":"5.00E-05"},0.00428946,"Novel_lncRNA","co_expression","Solyc03g006690.2","GO:0016491,GO:0055114,GO:0044710,GO:0003824,GO:0043167,GO:0003674,GO:0050662,GO:0008152,GO:0043168,GO:0048037,GO:0008150,GO:0005488,GO:0050660,GO:0036094,GO:0097159,GO:1901363,GO:0000166,GO:1901265","oxidation-reduction related","oxidoreductase activity,oxidation-reduction process,single-organism metabolic process,catalytic activity,ion binding,molecular_function,coenzyme binding,metabolic process,anion binding,cofactor binding,biological_process,binding,flavin adenine dinucleotide binding,small molecule binding,organic cyclic compound binding,heterocyclic compound binding,nucleotide binding,nucleoside phosphate binding",null,"--","--"]
["TCONS_00150053","XLOC_104931","7:4969119-4970000",{"v":5e-05,"d":"5.00E-05"},0.00428946,"Novel_lncRNA","co_expression","Solyc02g068710.3","GO:0032542,GO:0016667,GO:0016491,GO:0016209,GO:0043167,GO:0055114,GO:0005488,GO:0044710,GO:0003674,GO:0008150,GO:0097159,GO:1901363,GO:0008152,GO:0043168,GO:0003824,GO:0036094,GO:0035639,GO:0032553,GO:0005524,GO:0001883,GO:0032550,GO:0032555,GO:0017076,GO:0032549,GO:0001882,GO:0032559,GO:0030554,GO:0000166,GO:1901265","oxidation-reduction related","sulfiredoxin activity,oxidoreductase activity, acting on a sulfur group of donors,oxidoreductase activity,antioxidant activity,ion binding,oxidation-reduction process,binding,single-organism metabolic process,molecular_function,biological_process,organic cyclic compound binding,heterocyclic compound binding,metabolic process,anion binding,catalytic activity,small molecule binding,purine ribonucleoside triphosphate binding,ribonucleotide binding,ATP binding,purine nucleoside binding,purine ribonucleoside binding,purine ribonucleotide binding,purine nucleotide binding,ribonucleoside binding,nucleoside binding,adenyl ribonucleotide binding,adenyl nucleotide binding,nucleotide binding,nucleoside phosphate binding",null,"--","--"]
["TCONS_00150053","XLOC_104931","7:4969119-4970000",{"v":5e-05,"d":"5.00E-05"},0.00428946,"Novel_lncRNA","co_location","Solyc07g014620.2","GO:0009725,GO:0009719,GO:0010033,GO:0050896,GO:0008150,GO:0042221,GO:0009733","Hormone related","response to hormone stimulus,response to endogenous stimulus,response to organic substance,response to stimulus,biological_process,response to chemical stimulus,response to auxin stimulus",null,"sly04075","Plant hormone signal transduction"]
["TCONS_00150053","XLOC_104931","7:4969119-4970000",{"v":5e-05,"d":"5.00E-05"},0.00428946,"Novel_lncRNA","co_expression","Solyc01g081060.3","GO:0005618,GO:0030312,GO:0048046,GO:0005576,GO:0005623,GO:0044464,GO:0010411,GO:0016762,GO:0005575,GO:0044763,GO:0044036,GO:0003674,GO:0071944,GO:0044699,GO:0004553,GO:0008150,GO:0016798,GO:0071840,GO:0010410,GO:0010383,GO:0008152,GO:0044262,GO:0005975,GO:0044260,GO:0071555,GO:0044085,GO:0071554,GO:0045229,GO:0016043,GO:0006073,GO:0044042,GO:0042546,GO:0003824,GO:0016758,GO:0044237,GO:0043170,GO:0016740,GO:0005976,GO:0044264,GO:0016787,GO:0016757,GO:0009987,GO:0071704,GO:0044238","Cell wall component related","cell wall,external encapsulating structure,apoplast,extracellular region,cell,cell part,xyloglucan metabolic process,xyloglucan:xyloglucosyl transferase activity,cellular_component,single-organism cellular process,cell wall macromolecule metabolic process,molecular_function,cell periphery,single-organism process,hydrolase activity, hydrolyzing O-glycosyl compounds,biological_process,hydrolase activity, acting on glycosyl bonds,cellular component organization or biogenesis,hemicellulose metabolic process,cell wall polysaccharide metabolic process,metabolic process,cellular carbohydrate metabolic process,carbohydrate metabolic process,cellular macromolecule metabolic process,cell wall organization,cellular component biogenesis,cell wall organization or biogenesis,external encapsulating structure organization,cellular component organization,cellular glucan metabolic process,glucan metabolic process,cell wall biogenesis,catalytic activity,transferase activity, transferring hexosyl groups,cellular metabolic process,macromolecule metabolic process,transferase activity,polysaccharide metabolic process,cellular polysaccharide metabolic process,hydrolase activity,transferase activity, transferring glycosyl groups,cellular process,organic substance metabolic process,primary metabolic process",null,"--","--"]
["TCONS_00189697","XLOC_134491","10:5479873-5485103",0.00035,0.0190872,"Novel_lncRNA","co_location","Solyc10g017510.3","GO:0008150,GO:0003824,GO:0008152,GO:0016705,GO:0097159,GO:1901363,GO:0005506,GO:0003674,GO:0004497,GO:0005488,GO:0046906,GO:0020037,GO:0016491,GO:0043167,GO:0046914,GO:0044710,GO:0055114,GO:0043169,GO:0046872","oxidation-reduction related","biological_process,catalytic activity,metabolic process,oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen,organic cyclic compound binding,heterocyclic compound binding,iron ion binding,molecular_function,monooxygenase activity,binding,tetrapyrrole binding,heme binding,oxidoreductase activity,ion binding,transition metal ion binding,single-organism metabolic process,oxidation-reduction process,cation binding,metal ion binding",null,"--","--"]
["TCONS_00189697","XLOC_134491","10:5479873-5485103",0.00035,0.0190872,"Novel_lncRNA","co_location","Solyc10g017570.3","GO:0008150,GO:0003824,GO:0008152,GO:0003674,GO:0016491","oxidation-reduction related","biological_process,catalytic activity,metabolic process,molecular_function,oxidoreductase activity",null,"sly01110,sly00902","Biosynthesis of secondary metabolites,Monoterpenoid biosynthesis"]
["TCONS_00189697","XLOC_134491","10:5479873-5485103",0.00035,0.0190872,"Novel_lncRNA","co_location","Solyc10g017600.3","GO:0071555,GO:0045229,GO:0071554,GO:0043170,GO:0010393,GO:0045488,GO:0005976,GO:0008150,GO:0071704,GO:0003824,GO:0044238,GO:0008152,GO:0031090,GO:0005975,GO:0044723,GO:0005623,GO:0044464,GO:0045489,GO:0008194,GO:0047262,GO:0009987,GO:0044431,GO:0012505,GO:0043231,GO:0043227,GO:0009059,GO:0071840,GO:0009058,GO:0016043,GO:0016740,GO:0044699,GO:0003674,GO:0043229,GO:0043226,GO:0044763,GO:1901576,GO:0000139,GO:0000271,GO:0044424,GO:0016758,GO:0016051,GO:0016757,GO:0005622,GO:0044446,GO:0044422,GO:0005575,GO:0005794,GO:0016020,GO:0005737,GO:0044444","Cell wall component related","cell wall organization,external encapsulating structure organization,cell wall organization or biogenesis,macromolecule metabolic process,galacturonan metabolic process,pectin metabolic process,polysaccharide metabolic process,biological_process,organic substance metabolic process,catalytic activity,primary metabolic process,metabolic process,organelle membrane,carbohydrate metabolic process,single-organism carbohydrate metabolic process,cell,cell part,pectin biosynthetic process,UDP-glycosyltransferase activity,polygalacturonate 4-alpha-galacturonosyltransferase activity,cellular process,Golgi apparatus part,endomembrane system,intracellular membrane-bounded organelle,membrane-bounded organelle,macromolecule biosynthetic process,cellular component organization or biogenesis,biosynthetic process,cellular component organization,transferase activity,single-organism process,molecular_function,intracellular organelle,organelle,single-organism cellular process,organic substance biosynthetic process,Golgi membrane,polysaccharide biosynthetic process,intracellular part,transferase activity, transferring hexosyl groups,carbohydrate biosynthetic process,transferase activity, transferring glycosyl groups,intracellular,intracellular organelle part,organelle part,cellular_component,Golgi apparatus,membrane,cytoplasm,cytoplasmic part",null,"sly01110,sly00520,sly00500","Biosynthesis of secondary metabolites,Amino sugar and nucleotide sugar metabolism,Starch and sucrose metabolism"]

{"sheet":"fig. 7 c","index":2,"n_rows":29,"n_cols":11,"rows_kept":29,"flags":["formulas_cached_only"]}
["Table S10. Data of lncRNA-mRNA network"]
["transcript_id","gene_id","pvalue","qvalue","Status","Target_prediction_method","Target_gene_id","Target_GO_id","Target_GO_description","Target_KO_id","Target_KO_description"]
["TCONS_00190110","XLOC_134815",0.00105,0.0410637,"Novel_lncRNA","co_expression","Solyc07g026650.3","GO:0044710,GO:0009815,GO:0005488,GO:0016491,GO:0046872,GO:0043169,GO:0055114,GO:0043167,GO:0016641,GO:0003824,GO:0008152,GO:0016638,GO:0008150,GO:0051213,GO:0009888,GO:0071704,GO:0003674,GO:0016706,GO:0044237,GO:0048856,GO:0071554,GO:0032502,GO:0010089,GO:0016705,GO:0044036,GO:0010087,GO:0044260,GO:0009987,GO:0044699,GO:0043170,GO:0044763,GO:0071840","single-organism metabolic process,1-aminocyclopropane-1-carboxylate oxidase activity,binding,oxidoreductase activity,metal ion binding,cation binding,oxidation-reduction process,ion binding,oxidoreductase activity, acting on the CH-NH2 group of donors, oxygen as acceptor,catalytic activity,metabolic process,oxidoreductase activity, acting on the CH-NH2 group of donors,biological_process,dioxygenase activity,tissue development,organic substance metabolic process,molecular_function,oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors,cellular metabolic process,anatomical structure development,cell wall organization or biogenesis,developmental process,xylem development,oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen,cell wall macromolecule metabolic process,phloem or xylem histogenesis,cellular macromolecule metabolic process,cellular process,single-organism process,macromolecule metabolic process,single-organism cellular process,cellular component organization or biogenesis","sly01110,sly00270,sly01100","Biosynthesis of secondary metabolites,Cysteine and methionine metabolism,Metabolic pathways"]
["TCONS_00190110","XLOC_134815",0.00105,0.0410637,"Novel_lncRNA","co_expression","Solyc08g081000.3","GO:0051213,GO:0016706,GO:0016705,GO:0016491,GO:0055114,GO:0044710,GO:0046872,GO:0043169,GO:0003824,GO:0044262,GO:0005975,GO:0044036,GO:0043167,GO:0005976,GO:0010410,GO:0016051,GO:0010383,GO:0034637,GO:0046914,GO:0009791,GO:0022414,GO:0048608,GO:0061458,GO:0044264,GO:0044707,GO:0033692,GO:0000003,GO:0001071,GO:0003700,GO:0044723,GO:0048731,GO:0032501,GO:0007275,GO:0003674,GO:0005515,GO:0003006,GO:0000271,GO:0006464,GO:0036211,GO:0071554,GO:0032502,GO:0008152,GO:0045492,GO:0045491,GO:0048856,GO:0070592,GO:0042546,GO:0044038,GO:0070589,GO:0050665,GO:0016926,GO:0043412,GO:0044699,GO:0042743,GO:0008150,GO:0044267,GO:0044763,GO:0007049,GO:0005488,GO:1901576,GO:0072593,GO:0009058,GO:0070646,GO:0010413,GO:0008270,GO:0071704,GO:0071840,GO:0044238,GO:0010228,GO:0044249,GO:0003677,GO:0097159,GO:1901363,GO:0043231,GO:0043227,GO:0005634,GO:0000278,GO:0044085,GO:0019538,GO:0070647,GO:0034645,GO:0016070,GO:0009059,GO:0044237,GO:0010467,GO:1901360,GO:0005575,GO:0044424,GO:0043229,GO:0043226,GO:0044260,GO:0005623,GO:0044464,GO:0006807,GO:0046483,GO:0006725,GO:0090304,GO:0005622,GO:0034641,GO:0043170,GO:0009987,GO:0003676,GO:0006396,GO:0006139","dioxygenase activity,oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors,oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen,oxidoreductase activity,oxidation-reduction process,single-organism metabolic process,metal ion binding,cation binding,catalytic activity,cellular carbohydrate metabolic process,carbohydrate metabolic process,cell wall macromolecule metabolic process,ion binding,polysaccharide metabolic process,hemicellulose metabolic process,carbohydrate biosynthetic process,cell wall polysaccharide metabolic process,cellular carbohydrate biosynthetic process,transition metal ion binding,post-embryonic development,reproductive process,reproductive structure development,reproductive system development,cellular polysaccharide metabolic process,single-multicellular organism process,cellular polysaccharide biosynthetic process,reproduction,nucleic acid binding transcription factor activity,sequence-specific DNA binding transcription factor activity,single-organism carbohydrate metabolic process,system development,multicellular organismal process,multicellular organismal development,molecular_function,protein binding,developmental process involved in reproduction,polysaccharide biosynthetic process,cellular protein modification process,protein modification process,cell wall organization or biogenesis,developmental process,metabolic process,xylan biosynthetic process,xylan metabolic process,anatomical structure development,cell wall polysaccharide biosynthetic process,cell wall biogenesis,cell wall macromolecule biosynthetic process,cellular component macromolecule biosynthetic process,hydrogen peroxide biosynthetic process,protein desumoylation,macromolecule modification,single-organism process,hydrogen peroxide metabolic process,biological_process,cellular protein metabolic process,single-organism cellular process,cell cycle,binding,organic substance biosynthetic process,reactive oxygen species metabolic process,biosynthetic process,protein modification by small protein removal,glucuronoxylan metabolic process,zinc ion binding,organic substance metabolic process,cellular component organization or biogenesis,primary metabolic process,vegetative to reproductive phase transition of meristem,cellular biosynthetic process,DNA binding,organic cyclic compound binding,heterocyclic compound binding,intracellular membrane-bounded organelle,membrane-bounded organelle,nucleus,mitotic cell cycle,cellular component biogenesis,protein metabolic process,protein modification by small protein conjugation or removal,cellular macromolecule biosynthetic process,RNA metabolic process,macromolecule biosynthetic process,cellular metabolic process,gene expression,organic cyclic compound metabolic process,cellular_component,intracellular part,intracellular organelle,organelle,cellular macromolecule metabolic process,cell,cell part,nitrogen compound metabolic process,heterocycle metabolic process,cellular aromatic compound metabolic process,nucleic acid metabolic process,intracellular,cellular nitrogen compound metabolic process,macromolecule metabolic process,cellular process,nucleic acid binding,RNA processing,nucleobase-containing compound metabolic process","--","--"]
["TCONS_00190110","XLOC_134815",0.00105,0.0410637,"Novel_lncRNA","co_expression","Solyc03g031880.3","GO:0016491,GO:0055114,GO:0003824,GO:0044710,GO:0008150,GO:0003674,GO:0008152","oxidoreductase activity,oxidation-reduction process,catalytic activity,single-organism metabolic process,biological_process,molecular_function,metabolic process","sly00330,sly00410","Arginine and proline metabolism,beta-Alanine metabolism"]
["TCONS_00190110","XLOC_134815",0.00105,0.0410637,"Novel_lncRNA","co_expression","Solyc03g083440.3","GO:0003824,GO:0048037,GO:0055114,GO:0044710,GO:0016491,GO:0008152,GO:0008150,GO:0043648,GO:0043650,GO:0016040,GO:0045181,GO:0019752,GO:0043167,GO:0043436,GO:0006082,GO:0006536,GO:0010181,GO:0046872,GO:0043169,GO:0009064,GO:0005506,GO:0006537,GO:0015930,GO:0050662,GO:0016638,GO:0044281,GO:0003674,GO:0016639,GO:0050660,GO:0043168,GO:0071704,GO:0006520,GO:0009084,GO:0044238,GO:0016053,GO:0046394,GO:0044237,GO:0046914,GO:0044711,GO:1901605,GO:0051536,GO:0051540,GO:0044283,GO:0008652,GO:1901607,GO:1901564,GO:0009987,GO:1901566,GO:0097159,GO:1901363,GO:0005488,GO:0032553,GO:0036094,GO:0009058,GO:0000166,GO:1901265,GO:1901576,GO:0006807,GO:0044249","catalytic activity,cofactor binding,oxidation-reduction process,single-organism metabolic process,oxidoreductase activity,metabolic process,biological_process,dicarboxylic acid metabolic process,dicarboxylic acid biosynthetic process,glutamate synthase (NADH) activity,glutamate synthase activity, NAD(P)H as acceptor,carboxylic acid metabolic process,ion binding,oxoacid metabolic process,organic acid metabolic process,glutamate metabolic process,FMN binding,metal ion binding,cation binding,glutamine family amino acid metabolic process,iron ion binding,glutamate biosynthetic process,glutamate synthase activity,coenzyme binding,oxidoreductase activity, acting on the CH-NH2 group of donors,small molecule metabolic process,molecular_function,oxidoreductase activity, acting on the CH-NH2 group of donors, NAD or NADP as acceptor,flavin adenine dinucleotide binding,anion binding,organic substance metabolic process,cellular amino acid metabolic process,glutamine family amino acid biosynthetic process,primary metabolic process,organic acid biosynthetic process,carboxylic acid biosynthetic process,cellular metabolic process,transition metal ion binding,single-organism biosynthetic process,alpha-amino acid metabolic process,iron-sulfur cluster binding,metal cluster binding,small molecule biosynthetic process,cellular amino acid biosynthetic process,alpha-amino acid biosynthetic process,organonitrogen compound metabolic process,cellular process,organonitrogen compound biosynthetic process,organic cyclic compound binding,heterocyclic compound binding,binding,ribonucleotide binding,small molecule binding,biosynthetic process,nucleotide binding,nucleoside phosphate binding,organic substance biosynthetic process,nitrogen compound metabolic process,cellular biosynthetic process","sly01100,sly00250,sly01110,sly00910,sly01230","Metabolic pathways,Alanine, aspartate and glutamate metabolism,Biosynthesis of secondary metabolites,Nitrogen metabolism,Biosynthesis of amino acids"]
["TCONS_00190110","XLOC_134815",0.00105,0.0410637,"Novel_lncRNA","co_expression","Solyc10g076680.2","GO:0051213,GO:0016706,GO:0016705,GO:0016491,GO:0055114,GO:0044710,GO:0003824,GO:0003674,GO:0008152,GO:0008150","dioxygenase activity,oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors,oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen,oxidoreductase activity,oxidation-reduction process,single-organism metabolic process,catalytic activity,molecular_function,metabolic process,biological_process","--","--"]
["TCONS_00190110","XLOC_134815",0.00105,0.0410637,"Novel_lncRNA","co_expression","Solyc01g017090.3","GO:0016491,GO:0055114,GO:0044710,GO:0016651,GO:0003824,GO:0003954,GO:0050136,GO:0016310,GO:0006091,GO:0045333,GO:0016655,GO:0015980,GO:0003674,GO:0042773,GO:0008152,GO:0006119,GO:0022904,GO:0008137,GO:0008150,GO:0006796,GO:0006793,GO:0044237,GO:0022900,GO:0009987","oxidoreductase activity,oxidation-reduction process,single-organism metabolic process,oxidoreductase activity, acting on NAD(P)H,catalytic activity,NADH dehydrogenase activity,NADH dehydrogenase (quinone) activity,phosphorylation,generation of precursor metabolites and energy,cellular respiration,oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor,energy derivation by oxidation of organic compounds,molecular_function,ATP synthesis coupled electron transport,metabolic process,oxidative phosphorylation,respiratory electron transport chain,NADH dehydrogenase (ubiquinone) activity,biological_process,phosphate-containing compound metabolic process,phosphorus metabolic process,cellular metabolic process,electron transport chain,cellular process","sly01100,sly00190","Metabolic pathways,Oxidative phosphorylation"]
["TCONS_00190110","XLOC_134815",0.00105,0.0410637,"Novel_lncRNA","co_expression","Solyc05g005470.3","GO:0016667,GO:0016491,GO:0047134,GO:0016668,GO:0016651,GO:0003674,GO:0003824","oxidoreductase activity, acting on a sulfur group of donors,oxidoreductase activity,protein-disulfide reductase activity,oxidoreductase activity, acting on a sulfur group of donors, NAD(P) as acceptor,oxidoreductase activity, acting on NAD(P)H,molecular_function,catalytic activity","--","--"]
["TCONS_00190110","XLOC_134815",0.00105,0.0410637,"Novel_lncRNA","co_expression","Solyc11g008680.2","GO:0044710,GO:0016491,GO:0044281,GO:0044711,GO:0055114,GO:0044283,GO:0043436,GO:0006082,GO:0003824,GO:0019752,GO:0016053,GO:0046394,GO:0008152,GO:1901576,GO:0009058,GO:0008150,GO:0044249,GO:0071704,GO:0045300,GO:0044238,GO:0003674,GO:0044237,GO:0006629,GO:0072330,GO:0016717,GO:0016705,GO:0043231,GO:0043227,GO:0009987,GO:0032787,GO:0043229,GO:0043226,GO:0006631,GO:0006633,GO:0005575,GO:0044255,GO:0044424,GO:0008610,GO:0005622,GO:0005623,GO:0044464,GO:0009507,GO:0009536,GO:0005737,GO:0044444","single-organism metabolic process,oxidoreductase activity,small molecule metabolic process,single-organism biosynthetic process,oxidation-reduction process,small molecule biosynthetic process,oxoacid metabolic process,organic acid metabolic process,catalytic activity,carboxylic acid metabolic process,organic acid biosynthetic process,carboxylic acid biosynthetic process,metabolic process,organic substance biosynthetic process,biosynthetic process,biological_process,cellular biosynthetic process,organic substance metabolic process,acyl-[acyl-carrier-protein] desaturase activity,primary metabolic process,molecular_function,cellular metabolic process,lipid metabolic process,monocarboxylic acid biosynthetic process,oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water,oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen,intracellular membrane-bounded organelle,membrane-bounded organelle,cellular process,monocarboxylic acid metabolic process,intracellular organelle,organelle,fatty acid metabolic process,fatty acid biosynthetic process,cellular_component,cellular lipid metabolic process,intracellular part,lipid biosynthetic process,intracellular,cell,cell part,chloroplast,plastid,cytoplasm,cytoplasmic part","sly01040,sly00061,sly01212","Biosynthesis of unsaturated fatty acids,Fatty acid biosynthesis,Fatty acid metabolism"]
["TCONS_00190110","XLOC_134815",0.00105,0.0410637,"Novel_lncRNA","co_expression","Solyc11g021090.2","--","--","sly01100,sly00190","Metabolic pathways,Oxidative phosphorylation"]
["TCONS_00099819","XLOC_069665",{"v":5e-05,"d":"5.00E-05"},0.00428946,"Novel_lncRNA","co_expression","Solyc06g060070.3","GO:0051213,GO:0016706,GO:0016705,GO:0016491,GO:0044711,GO:0006066,GO:0055114,GO:0046165,GO:1901615,GO:0044710,GO:1901617,GO:0046872,GO:0043169,GO:0044283,GO:0003824,GO:0015698,GO:0010106,GO:0006694,GO:0008202,GO:0006950,GO:0007154,GO:0043167,GO:0006826,GO:0010167,GO:0042446,GO:0016129,GO:0016132,GO:0016128,GO:0016131,GO:0015706,GO:0010817,GO:0065007,GO:0033554,GO:0051716,GO:0006820,GO:0042445,GO:0065008,GO:0050896,GO:1901698,GO:0003674,GO:0042221,GO:0009267,GO:0042594,GO:1901362,GO:0008610,GO:0031669,GO:0031667,GO:0030001,GO:0008152,GO:0000041,GO:0006629,GO:0009605,GO:0031668,GO:0071496,GO:0009991,GO:0006812,GO:0044699,GO:0008150,GO:0006811,GO:1901700,GO:0044763,GO:0005488,GO:1901576,GO:0044281,GO:0009058,GO:0071704,GO:0071705,GO:0044238,GO:0010035,GO:1901360,GO:0044765,GO:0006810,GO:0051234,GO:0009987,GO:0051179","dioxygenase activity,oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors,oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen,oxidoreductase activity,single-organism biosynthetic process,alcohol metabolic process,oxidation-reduction process,alcohol biosynthetic process,organic hydroxy compound metabolic process,single-organism metabolic process,organic hydroxy compound biosynthetic process,metal ion binding,cation binding,small molecule biosynthetic process,catalytic activity,inorganic anion transport,cellular response to iron ion starvation,steroid biosynthetic process,steroid metabolic process,response to stress,cell communication,ion binding,iron ion transport,response to nitrate,hormone biosynthetic process,phytosteroid biosynthetic process,brassinosteroid biosynthetic process,phytosteroid metabolic process,brassinosteroid metabolic process,nitrate transport,regulation of hormone levels,biological regulation,cellular response to stress,cellular response to stimulus,anion transport,hormone metabolic process,regulation of biological quality,response to stimulus,response to nitrogen compound,molecular_function,response to chemical stimulus,cellular response to starvation,response to starvation,organic cyclic compound biosynthetic process,lipid biosynthetic process,cellular response to nutrient levels,response to nutrient levels,metal ion transport,metabolic process,transition metal ion transport,lipid metabolic process,response to external stimulus,cellular response to extracellular stimulus,cellular response to external stimulus,response to extracellular stimulus,cation transport,single-organism process,biological_process,ion transport,response to oxygen-containing compound,single-organism cellular process,binding,organic substance biosynthetic process,small molecule metabolic process,biosynthetic process,organic substance metabolic process,nitrogen compound transport,primary metabolic process,response to inorganic substance,organic cyclic compound metabolic process,single-organism transport,transport,establishment of localization,cellular process,localization","sly00270,sly01110,sly01100","Cysteine and methionine metabolism,Biosynthesis of secondary metabolites,Metabolic pathways"]
["TCONS_00099819","XLOC_069665",{"v":5e-05,"d":"5.00E-05"},0.00428946,"Novel_lncRNA","co_location","Solyc07g014670.3","GO:0055114,GO:0020037,GO:0044710,GO:0046906,GO:0016491,GO:0005506,GO:0003824,GO:0004497,GO:0008150,GO:0043169,GO:0003674,GO:0046914,GO:0046872,GO:0016705,GO:0008152,GO:0043167,GO:0005488,GO:0097159,GO:1901363","oxidation-reduction process,heme binding,single-organism metabolic process,tetrapyrrole binding,oxidoreductase activity,iron ion binding,catalytic activity,monooxygenase activity,biological_process,cation binding,molecular_function,transition metal ion binding,metal ion binding,oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen,metabolic process,ion binding,binding,organic cyclic compound binding,heterocyclic compound binding","--","--"]
["TCONS_00099819","XLOC_069665",{"v":5e-05,"d":"5.00E-05"},0.00428946,"Novel_lncRNA","co_expression","Solyc05g055590.2","GO:0016491,GO:0055114,GO:0003676,GO:0005488,GO:0044710,GO:0003674,GO:0003677,GO:0008150,GO:0097159,GO:1901363,GO:0008152,GO:0003824,GO:0005515","oxidoreductase activity,oxidation-reduction process,nucleic acid binding,binding,single-organism metabolic process,molecular_function,DNA binding,biological_process,organic cyclic compound binding,heterocyclic compound binding,metabolic process,catalytic activity,protein binding","--","--"]
["TCONS_00099819","XLOC_069665",{"v":5e-05,"d":"5.00E-05"},0.00428946,"Novel_lncRNA","co_expression","Solyc01g108630.3","GO:0016491,GO:0055114,GO:0044710,GO:0003824,GO:0051536,GO:0051540,GO:0020037,GO:0046906,GO:0003674,GO:0008152,GO:0008150,GO:0005488,GO:0097159,GO:1901363","oxidoreductase activity,oxidation-reduction process,single-organism metabolic process,catalytic activity,iron-sulfur cluster binding,metal cluster binding,heme binding,tetrapyrrole binding,molecular_function,metabolic process,biological_process,binding,organic cyclic compound binding,heterocyclic compound binding","sly00910","Nitrogen metabolism"]
["TCONS_00099819","XLOC_069665",{"v":5e-05,"d":"5.00E-05"},0.00428946,"Novel_lncRNA","co_expression","Solyc03g006690.2","GO:0016491,GO:0055114,GO:0044710,GO:0003824,GO:0043167,GO:0003674,GO:0050662,GO:0008152,GO:0043168,GO:0048037,GO:0008150,GO:0005488,GO:0050660,GO:0036094,GO:0097159,GO:1901363,GO:0000166,GO:1901265","oxidoreductase activity,oxidation-reduction process,single-organism metabolic process,catalytic activity,ion binding,molecular_function,coenzyme binding,metabolic process,anion binding,cofactor binding,biological_process,binding,flavin adenine dinucleotide binding,small molecule binding,organic cyclic compound binding,heterocyclic compound binding,nucleotide binding,nucleoside phosphate binding","--","--"]
["TCONS_00099819","XLOC_069665",{"v":5e-05,"d":"5.00E-05"},0.00428946,"Novel_lncRNA","co_expression","Solyc02g068710.3","GO:0032542,GO:0016667,GO:0016491,GO:0016209,GO:0043167,GO:0055114,GO:0005488,GO:0044710,GO:0003674,GO:0008150,GO:0097159,GO:1901363,GO:0008152,GO:0043168,GO:0003824,GO:0036094,GO:0035639,GO:0032553,GO:0005524,GO:0001883,GO:0032550,GO:0032555,GO:0017076,GO:0032549,GO:0001882,GO:0032559,GO:0030554,GO:0000166,GO:1901265","sulfiredoxin activity,oxidoreductase activity, acting on a sulfur group of donors,oxidoreductase activity,antioxidant activity,ion binding,oxidation-reduction process,binding,single-organism metabolic process,molecular_function,biological_process,organic cyclic compound binding,heterocyclic compound binding,metabolic process,anion binding,catalytic activity,small molecule binding,purine ribonucleoside triphosphate binding,ribonucleotide binding,ATP binding,purine nucleoside binding,purine ribonucleoside binding,purine ribonucleotide binding,purine nucleotide binding,ribonucleoside binding,nucleoside binding,adenyl ribonucleotide binding,adenyl nucleotide binding,nucleotide binding,nucleoside phosphate binding","--","--"]
["TCONS_00125195","XLOC_087436",{"v":5e-05,"d":"5.00E-05"},0.00428946,"Novel_lncRNA","co_location","Solyc11g056410.2","GO:0016020,GO:0004129,GO:0016675,GO:0016676,GO:0015077,GO:0015002,GO:0015078,GO:0022891,GO:0005575,GO:0022892,GO:0015075,GO:0022890,GO:0008324,GO:0016491,GO:0005488,GO:0022857,GO:0003674,GO:0005507,GO:0005215,GO:0003824,GO:0043167,GO:0046914,GO:0043169,GO:0046872","membrane,cytochrome-c oxidase activity,oxidoreductase activity, acting on a heme group of donors,oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor,monovalent inorganic cation transmembrane transporter activity,heme-copper terminal oxidase activity,hydrogen ion transmembrane transporter activity,substrate-specific transmembrane transporter activity,cellular_component,substrate-specific transporter activity,ion transmembrane transporter activity,inorganic cation transmembrane transporter activity,cation transmembrane transporter activity,oxidoreductase activity,binding,transmembrane transporter activity,molecular_function,copper ion binding,transporter activity,catalytic activity,ion binding,transition metal ion binding,cation binding,metal ion binding","sly00190,sly01100","Oxidative phosphorylation,Metabolic pathways"]
["TCONS_00125195","XLOC_087436",{"v":5e-05,"d":"5.00E-05"},0.00428946,"Novel_lncRNA","co_location","Solyc11g056390.2","--","--","sly00190,sly01100","Oxidative phosphorylation,Metabolic pathways"]
["TCONS_00125195","XLOC_087436",{"v":5e-05,"d":"5.00E-05"},0.00428946,"Novel_lncRNA","co_location","Solyc11g056370.2","GO:0016020,GO:0044425,GO:0055114,GO:0005575,GO:0005739,GO:0016491,GO:0044710,GO:0008137,GO:0003954,GO:0050136,GO:0003674,GO:0005737,GO:0016655,GO:0008152,GO:0005623,GO:0044464,GO:0044444,GO:0070469,GO:0008150,GO:0031090,GO:0044429,GO:0031966,GO:0031967,GO:0031975,GO:0005740,GO:0044424,GO:0005622,GO:0003824,GO:0016651,GO:0043229,GO:0043226,GO:0044446,GO:0044422,GO:0043231,GO:0043227","membrane,membrane part,oxidation-reduction process,cellular_component,mitochondrion,oxidoreductase activity,single-organism metabolic process,NADH dehydrogenase (ubiquinone) activity,NADH dehydrogenase activity,NADH dehydrogenase (quinone) activity,molecular_function,cytoplasm,oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor,metabolic process,cell,cell part,cytoplasmic part,respiratory chain,biological_process,organelle membrane,mitochondrial part,mitochondrial membrane,organelle envelope,envelope,mitochondrial envelope,intracellular part,intracellular,catalytic activity,oxidoreductase activity, acting on NAD(P)H,intracellular organelle,organelle,intracellular organelle part,organelle part,intracellular membrane-bounded organelle,membrane-bounded organelle","sly00190,sly01100","Oxidative phosphorylation,Metabolic pathways"]
["TCONS_00125195","XLOC_087436",{"v":5e-05,"d":"5.00E-05"},0.00428946,"Novel_lncRNA","co_expression","Solyc03g096640.3","GO:0016491,GO:0008152,GO:0008150,GO:0003824,GO:0003674","oxidoreductase activity,metabolic process,biological_process,catalytic activity,molecular_function","sly00960,sly01100,sly01110","Tropane, piperidine and pyridine alkaloid biosynthesis,Metabolic pathways,Biosynthesis of secondary metabolites"]
["TCONS_00003208","XLOC_002621",0.00105,0.0410637,"Novel_lncRNA","co_expression","Solyc07g026650.3","GO:0044710,GO:0009815,GO:0005488,GO:0016491,GO:0046872,GO:0043169,GO:0055114,GO:0043167,GO:0016641,GO:0003824,GO:0008152,GO:0016638,GO:0008150,GO:0051213,GO:0009888,GO:0071704,GO:0003674,GO:0016706,GO:0044237,GO:0048856,GO:0071554,GO:0032502,GO:0010089,GO:0016705,GO:0044036,GO:0010087,GO:0044260,GO:0009987,GO:0044699,GO:0043170,GO:0044763,GO:0071840","oxidation-reduction related","sly01110,sly00270,sly01100","Biosynthesis of secondary metabolites,Cysteine and methionine metabolism,Metabolic pathways"]
["TCONS_00003208","XLOC_002621",0.00105,0.0410637,"Novel_lncRNA","co_expression","Solyc08g081000.3","GO:0051213,GO:0016706,GO:0016705,GO:0016491,GO:0055114,GO:0044710,GO:0046872,GO:0043169,GO:0003824,GO:0044262,GO:0005975,GO:0044036,GO:0043167,GO:0005976,GO:0010410,GO:0016051,GO:0010383,GO:0034637,GO:0046914,GO:0009791,GO:0022414,GO:0048608,GO:0061458,GO:0044264,GO:0044707,GO:0033692,GO:0000003,GO:0001071,GO:0003700,GO:0044723,GO:0048731,GO:0032501,GO:0007275,GO:0003674,GO:0005515,GO:0003006,GO:0000271,GO:0006464,GO:0036211,GO:0071554,GO:0032502,GO:0008152,GO:0045492,GO:0045491,GO:0048856,GO:0070592,GO:0042546,GO:0044038,GO:0070589,GO:0050665,GO:0016926,GO:0043412,GO:0044699,GO:0042743,GO:0008150,GO:0044267,GO:0044763,GO:0007049,GO:0005488,GO:1901576,GO:0072593,GO:0009058,GO:0070646,GO:0010413,GO:0008270,GO:0071704,GO:0071840,GO:0044238,GO:0010228,GO:0044249,GO:0003677,GO:0097159,GO:1901363,GO:0043231,GO:0043227,GO:0005634,GO:0000278,GO:0044085,GO:0019538,GO:0070647,GO:0034645,GO:0016070,GO:0009059,GO:0044237,GO:0010467,GO:1901360,GO:0005575,GO:0044424,GO:0043229,GO:0043226,GO:0044260,GO:0005623,GO:0044464,GO:0006807,GO:0046483,GO:0006725,GO:0090304,GO:0005622,GO:0034641,GO:0043170,GO:0009987,GO:0003676,GO:0006396,GO:0006139","oxidation-reduction related","--","--"]
["TCONS_00003208","XLOC_002621",0.00105,0.0410637,"Novel_lncRNA","co_expression","Solyc03g031880.3","GO:0016491,GO:0055114,GO:0003824,GO:0044710,GO:0008150,GO:0003674,GO:0008152","oxidation-reduction related","sly00330,sly00410","Arginine and proline metabolism,beta-Alanine metabolism"]
["TCONS_00003208","XLOC_002621",0.00105,0.0410637,"Novel_lncRNA","co_expression","Solyc03g083440.3","GO:0003824,GO:0048037,GO:0055114,GO:0044710,GO:0016491,GO:0008152,GO:0008150,GO:0043648,GO:0043650,GO:0016040,GO:0045181,GO:0019752,GO:0043167,GO:0043436,GO:0006082,GO:0006536,GO:0010181,GO:0046872,GO:0043169,GO:0009064,GO:0005506,GO:0006537,GO:0015930,GO:0050662,GO:0016638,GO:0044281,GO:0003674,GO:0016639,GO:0050660,GO:0043168,GO:0071704,GO:0006520,GO:0009084,GO:0044238,GO:0016053,GO:0046394,GO:0044237,GO:0046914,GO:0044711,GO:1901605,GO:0051536,GO:0051540,GO:0044283,GO:0008652,GO:1901607,GO:1901564,GO:0009987,GO:1901566,GO:0097159,GO:1901363,GO:0005488,GO:0032553,GO:0036094,GO:0009058,GO:0000166,GO:1901265,GO:1901576,GO:0006807,GO:0044249","oxidation-reduction related","sly01100,sly00250,sly01110,sly00910,sly01230","Metabolic pathways,Alanine, aspartate and glutamate metabolism,Biosynthesis of secondary metabolites,Nitrogen metabolism,Biosynthesis of amino acids"]
["TCONS_00003208","XLOC_002621",0.00105,0.0410637,"Novel_lncRNA","co_expression","Solyc10g076680.2","GO:0051213,GO:0016706,GO:0016705,GO:0016491,GO:0055114,GO:0044710,GO:0003824,GO:0003674,GO:0008152,GO:0008150","oxidation-reduction related","--","--"]
["TCONS_00003208","XLOC_002621",0.00105,0.0410637,"Novel_lncRNA","co_expression","Solyc01g017090.3","GO:0016491,GO:0055114,GO:0044710,GO:0016651,GO:0003824,GO:0003954,GO:0050136,GO:0016310,GO:0006091,GO:0045333,GO:0016655,GO:0015980,GO:0003674,GO:0042773,GO:0008152,GO:0006119,GO:0022904,GO:0008137,GO:0008150,GO:0006796,GO:0006793,GO:0044237,GO:0022900,GO:0009987","oxidation-reduction related","sly01100,sly00190","Metabolic pathways,Oxidative phosphorylation"]
["TCONS_00003208","XLOC_002621",0.00105,0.0410637,"Novel_lncRNA","co_expression","Solyc05g005470.3","GO:0016667,GO:0016491,GO:0047134,GO:0016668,GO:0016651,GO:0003674,GO:0003824","oxidation-reduction related","--","--"]
["TCONS_00003208","XLOC_002621",0.00105,0.0410637,"Novel_lncRNA","co_expression","Solyc11g008680.2","GO:0044710,GO:0016491,GO:0044281,GO:0044711,GO:0055114,GO:0044283,GO:0043436,GO:0006082,GO:0003824,GO:0019752,GO:0016053,GO:0046394,GO:0008152,GO:1901576,GO:0009058,GO:0008150,GO:0044249,GO:0071704,GO:0045300,GO:0044238,GO:0003674,GO:0044237,GO:0006629,GO:0072330,GO:0016717,GO:0016705,GO:0043231,GO:0043227,GO:0009987,GO:0032787,GO:0043229,GO:0043226,GO:0006631,GO:0006633,GO:0005575,GO:0044255,GO:0044424,GO:0008610,GO:0005622,GO:0005623,GO:0044464,GO:0009507,GO:0009536,GO:0005737,GO:0044444","oxidation-reduction related","sly01040,sly00061,sly01212","Biosynthesis of unsaturated fatty acids,Fatty acid biosynthesis,Fatty acid metabolism"]